ggKbase home page

AB_3033_bin_60_scaffold_2546

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_60_scaffold_2546_1
unknown

Not on your lists

comp(170..394)
DNA (225bp) protein (75aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_2
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

916..1488
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12284.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
AB_3033_bin_60_scaffold_2546_3
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(1757..1912)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U7Q3_9EURY
hypothetical protein
Tax=RBG_13_Euryarchaeota_31_8_curated
AB_3033_bin_60_scaffold_2546_4
unknown

Not on your lists

comp(2198..2743)
DNA (546bp) protein (182aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_5
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

2828..3565
DNA (738bp) protein (246aa)
CDP-alcohol phosphatidyltransferase id=17329847 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
CDP-alcohol phosphatidyltransferase
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
AB_3033_bin_60_scaffold_2546_6
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

3562..5280
DNA (1719bp) protein (573aa)
TPR domain protein id=4725888 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
AB_3033_bin_60_scaffold_2546_7
unknown

Not on your lists

5423..7249
DNA (1827bp) protein (609aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_8
unknown

Not on your lists

7246..8772
DNA (1527bp) protein (509aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_9
unknown

Not on your lists

8753..8935
DNA (183bp) protein (61aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_10
R_OP11_Woesebacteria_40_22, Woesebacteria, Microgenomates, Bacteria

Not on your lists

9349..9831
DNA (483bp) protein (161aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=2 Tax=Streptomyces RepID=D1WTT1_9ACTO id=43301 bin=ACD38 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_40_22_curated
AB_3033_bin_60_scaffold_2546_11
unknown

Not on your lists

comp(9867..10166)
DNA (300bp) protein (100aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10255..10764
DNA (510bp) protein (170aa)
hypothetical protein
transmembrane_regions id=5240768 bin=GW2011_AR10_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2546_13
unknown

Not on your lists

comp(10765..11025)
DNA (261bp) protein (87aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_14
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(11140..11295)
DNA (156bp) protein (52aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TY35_9EURY
hypothetical protein
Tax=RBG_13_Euryarchaeota_31_8_curated
AB_3033_bin_60_scaffold_2546_15
unknown

Not on your lists

comp(11424..12098)
DNA (675bp) protein (225aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_16
unknown

Not on your lists

12126..12416
DNA (291bp) protein (97aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_17
unknown

Not on your lists

12496..12585
DNA (90bp) protein (30aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_18
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

comp(12575..13924)
DNA (1350bp) protein (450aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase id=1250126 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_16_Zixibacteria_48_11_curated
AB_3033_bin_60_scaffold_2546_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13927..14889)
DNA (963bp) protein (321aa)
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=5043631 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Tax=CG_Woesearch_02
AB_3033_bin_60_scaffold_2546_20
unknown

Not on your lists

comp(15018..15581)
DNA (564bp) protein (188aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_21
Corynebacterium aurimucosum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15606..16610
DNA (1005bp) protein (335aa)
gapA; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=548476 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1); (Corynebacterium nigricans).;"
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Corynebacterium massiliense RepID=UPI0003B76202
AB_3033_bin_60_scaffold_2546_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

16658..17851
DNA (1194bp) protein (398aa)
3-phosphoglycerate kinase, phosphoglycerate kinase (EC:2.7.2.3)
Pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5241458 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2546_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

17848..18855
DNA (1008bp) protein (336aa)
4Fe-4S protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5G0V9_9ACTN
4fe-4S ferredoxin iron-sulfur binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_3033_bin_60_scaffold_2546_24
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

18852..19688
DNA (837bp) protein (279aa)
Oxidoreductase FAD/NAD(P)-binding domain protein id=4541515 bin=GWC2_OP3_44_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
AB_3033_bin_60_scaffold_2546_25
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

19690..20436
DNA (747bp) protein (249aa)
oxidoreductase n=1 Tax=Burkholderia kururiensis RepID=UPI000347A817
hydrogenase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
AB_3033_bin_60_scaffold_2546_26
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

20437..21723
DNA (1287bp) protein (429aa)
hydrogenase/sulfur reductase, alpha subunit
hydrogenase/sulfur reductase, alpha subunit id=5240634 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_60_scaffold_2546_27
unknown

Not on your lists

comp(21725..22252)
DNA (528bp) protein (176aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2546_28
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(22254..22643)
DNA (390bp) protein (130aa)
hypothetical protein
seg id=5240633 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_60_scaffold_2546_29
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

Not on your lists

22718..22894
DNA (177bp) protein (59aa)
Ferredoxin n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465Z8_METBF
Ferredoxin
Tax=RBG_13_RIF08_66_14_curated
AB_3033_bin_60_scaffold_2546_30
Thermosphaera aggregans, Thermosphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

22897..23112
DNA (216bp) protein (72aa)
4-oxalocrotonate tautomerase n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U155_THEAM
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:ADG90855.1}; TaxID=633148 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermosphaera.;" source="Thermosphaera aggregans (strain DSM 11486 / M11TL).;"
Displaying items 1-30 of 33 in total

View Taxonomy