ggKbase home page

AB_69_bin_160_scaffold_456

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_69_bin_160_scaffold_456_1
unknown

Not on your lists

comp(3..1208)
DNA (1206bp) protein (402aa)

This feature has no annotations

AB_69_bin_160_scaffold_456_2
unknown

Not on your lists

comp(1242..3056)
DNA (1815bp) protein (605aa)

This feature has no annotations

AB_69_bin_160_scaffold_456_3
unknown

Not on your lists

comp(3101..3826)
DNA (726bp) protein (242aa)

This feature has no annotations

AB_69_bin_160_scaffold_456_4
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(3845..4663)
DNA (819bp) protein (273aa)
Tax=CG_Pacearch_01
AB_69_bin_160_scaffold_456_5
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(4648..7593)
DNA (2946bp) protein (982aa)
Tax=CG_Micra_01
AB_69_bin_160_scaffold_456_6
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(7590..12278)
DNA (4689bp) protein (1563aa)
seg id=5800568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Micra_02
AB_69_bin_160_scaffold_456_7
archaeon Loki, Lokiarchaeota, Archaea

Not on your lists

12377..13489
DNA (1113bp) protein (371aa)
Tryptophan--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8H1_9EURY
Tryptophan--tRNA ligase {ECO:0000313|EMBL:KKK46458.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
Tryptophanyl-tRNA synthetase
AB_69_bin_160_scaffold_456_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13486..13677
DNA (192bp) protein (64aa)
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_456_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13674..14960)
DNA (1287bp) protein (429aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EB6C2
ribose-phosphate pyrophosphokinase
AB_69_bin_160_scaffold_456_10

Not on your lists

comp(15052..16368)
DNA (1317bp) protein (439aa)
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45507.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
AB_69_bin_160_scaffold_456_11
unknown

Not on your lists

16450..17154
DNA (705bp) protein (235aa)

This feature has no annotations

AB_69_bin_160_scaffold_456_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

17155..17784
DNA (630bp) protein (210aa)
Uncharacterized protein id=5799854 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_69_bin_160_scaffold_456_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


17811..19553
DNA (1743bp) protein (581aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5240563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_69_bin_160_scaffold_456_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

19550..20851
DNA (1302bp) protein (434aa)
Asparaginyl-tRNA synthetase id=5800298 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Asparaginyl-tRNA synthetase
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_69_bin_160_scaffold_456_15
unknown

Not on your lists

20885..21466
DNA (582bp) protein (194aa)

This feature has no annotations

AB_69_bin_160_scaffold_456_16
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21441..22199)
DNA (759bp) protein (253aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
prolipoprotein diacylglyceryl transferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B3DA5A
lgt; prolipoprotein diacylglyceryl transferase
AB_69_bin_160_scaffold_456_17
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

22304..22702
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SKI6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN16626.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
AB_69_bin_160_scaffold_456_18
unknown

Not on your lists

comp(22720..22857)
DNA (138bp) protein (46aa)
Rubredoxin n=2 Tax=Euryarchaeota RepID=M9SEL7_9EURY
Rubredoxin
AB_69_bin_160_scaffold_456_19

Not on your lists


comp(22867..24486)
DNA (1620bp) protein (540aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR9_THELI id=5103639 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase beta subunit
AB_69_bin_160_scaffold_456_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(24474..25976)
DNA (1503bp) protein (501aa)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5T3_METSL id=5103640 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase alpha subunit
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_456_21

Not on your lists

comp(26009..26812)
DNA (804bp) protein (268aa)
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47224.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
AB_69_bin_160_scaffold_456_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

27005..27640
DNA (636bp) protein (212aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
RNase HII id=5800606 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_456_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

27681..28262
DNA (582bp) protein (194aa)
rnhA; ribonuclease HIII (EC:3.1.26.4)
Ribonuclease id=5800785 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
AB_69_bin_160_scaffold_456_24
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

28283..28555
DNA (273bp) protein (91aa)
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Woesearch_01
AB_69_bin_160_scaffold_456_25
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

28556..28762
DNA (207bp) protein (69aa)
hybrid cluster protein n=1 Tax=Brachyspira innocens RepID=UPI000363615E
Iron-sulfur cluster assembly accessory protein
Tax=GWF1_Spirochaetes_41_5_curated
AB_69_bin_160_scaffold_456_26
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

28766..28957
DNA (192bp) protein (64aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z4M3_9BACT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EFC92367.1}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
4Fe-4S ferredoxin
AB_69_bin_160_scaffold_456_27
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

29037..29270
DNA (234bp) protein (78aa)
glutaredoxin-like protein
glutaredoxin-like protein id=5241603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_69_bin_160_scaffold_456_28
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

29272..30180
DNA (909bp) protein (303aa)
Thioredoxin reductase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QPS6_VULDI
thioredoxin reductase
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
AB_69_bin_160_scaffold_456_29
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

30177..30521
DNA (345bp) protein (115aa)
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WW1_METBU
hypothetical protein
Tax=CG_Pacearch_01
AB_69_bin_160_scaffold_456_30
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

30561..31214
DNA (654bp) protein (218aa)
Histidine triad (HIT) protein id=5800464 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
histidine triad (HIT) protein
Tax=CG_Woesearch_01
Displaying items 1-30 of 41 in total

View Taxonomy