ggKbase home page

AB_69_bin_160_scaffold_1219

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_69_bin_160_scaffold_1219_1
unknown

Not on your lists

comp(3..980)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000381BFF6
AB_69_bin_160_scaffold_1219_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1091..2248)
DNA (1158bp) protein (386aa)
Transporter, CPA2 family (2.A.37) n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UUI1_SULAO
CPA2 family transporter
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_1219_3

Not on your lists

3025..4161
DNA (1137bp) protein (379aa)
Na+/H+-exchanging protein id=5048648 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Na+/H+-exchanging protein {ECO:0000313|EMBL:KHO45311.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
sodium/hydrogen exchanger
AB_69_bin_160_scaffold_1219_4
unknown

Not on your lists

4226..5350
DNA (1125bp) protein (375aa)

This feature has no annotations

AB_69_bin_160_scaffold_1219_5
unknown

Not on your lists

comp(5325..5648)
DNA (324bp) protein (108aa)

This feature has no annotations

AB_69_bin_160_scaffold_1219_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(5703..6656)
DNA (954bp) protein (318aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_1219_7
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6685..8283)
DNA (1599bp) protein (533aa)
Putative Na(+)/phosphate symporter n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3W9_UNCMA
putative Na(+)/phosphate symporter
Putative Na(+)/phosphate symporter {ECO:0000313|EMBL:CAJ36924.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
AB_69_bin_160_scaffold_1219_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8310..8852)
DNA (543bp) protein (181aa)
YdeN-like protein; K07002 id=5045338 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ydeN; putative sulfatase
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_69_bin_160_scaffold_1219_9

Not on your lists

comp(8896..9630)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XT12_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD28221.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Radical SAM domain-containing protein
AB_69_bin_160_scaffold_1219_10
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9717..11108
DNA (1392bp) protein (464aa)
glutamate synthase (NADPH) GltB2 subunit (EC:1.4.1.13)
Archaeal glutamate synthase [NADPH] {ECO:0000256|PIRNR:PIRNR006429}; EC=1.4.1.13 {ECO:0000256|PIRNR:PIRNR006429};; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
Archaeal glutamate synthase [NADPH] n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7D8_METMS
AB_69_bin_160_scaffold_1219_11
R_OP11_Roizmanbacteria_39_24, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

11108..11944
DNA (837bp) protein (279aa)
MutT/nudix family protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IH60_9FIRM
NUDIX hydrolase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_24_curated
AB_69_bin_160_scaffold_1219_12
RHI_OD1_Adlerbacteria_53_18, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

11928..12380
DNA (453bp) protein (151aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium RepID=K2DRC0_9BACT
NUDIX family hydrolase
Tax=RIFCSPHIGHO2_12_FULL_OD1_Adlerbacteria_53_18_curated
AB_69_bin_160_scaffold_1219_13
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12354..12692)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00035DC997
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
AB_69_bin_160_scaffold_1219_14
unknown

Not on your lists

comp(12728..12904)
DNA (177bp) protein (59aa)

This feature has no annotations

AB_69_bin_160_scaffold_1219_15
unknown

Not on your lists

comp(13056..13403)
DNA (348bp) protein (116aa)

This feature has no annotations

AB_69_bin_160_scaffold_1219_16
unknown

Not on your lists

comp(13447..14322)
DNA (876bp) protein (292aa)

This feature has no annotations

AB_69_bin_160_scaffold_1219_17
GWC2_OP11_41_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14319..14939)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BAB52
Uncharacterized protein {ECO:0000313|EMBL:KKS23152.1}; TaxID=1618487 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_41_7.;"
hypothetical protein
AB_69_bin_160_scaffold_1219_18
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14936..15496)
DNA (561bp) protein (187aa)
SAM-dependent methyltransferase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A4D2_THEGJ
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:ACS33094.1}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3).;"
AB_69_bin_160_scaffold_1219_19
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15642..16094
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI00025583D0
Uncharacterized protein {ECO:0000313|EMBL:EZH75907.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
AB_69_bin_160_scaffold_1219_20

Not on your lists

16167..16358
DNA (192bp) protein (64aa)
Marine sediment metagenome DNA, contig: S12H4_L05252 {ECO:0000313|EMBL:GAI85299.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=5041610 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cold shock DNA binding domain-containing protein
AB_69_bin_160_scaffold_1219_21
RHI_Saccharibacteria_47_17, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(16415..16948)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RLB0_9ACTO id=6990 bin=ACD13 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_17_curated
AB_69_bin_160_scaffold_1219_22
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

17022..17231
DNA (210bp) protein (70aa)
Tax=CG_Woesearch_03
AB_69_bin_160_scaffold_1219_23
unknown

Not on your lists

comp(17233..18327)
DNA (1095bp) protein (365aa)

This feature has no annotations

AB_69_bin_160_scaffold_1219_24

Not on your lists

comp(18387..19865)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003762662
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38703.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Radical SAM domain protein
AB_69_bin_160_scaffold_1219_25
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

19941..20699
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZEE3_9BACT
zinc/iron permease
Tax=RBG_13_OP11_40_15_curated
AB_69_bin_160_scaffold_1219_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20701..21348
DNA (648bp) protein (216aa)
GCN5-related N-acetyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQU8_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EEF57805.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
wecD; Acetyltransferase, GNAT family
AB_69_bin_160_scaffold_1219_27
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21373..22002
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Fangia hongkongensis RepID=UPI00037A2A1C
thiamine pyrophosphokinase
Thiamine pyrophosphokinase {ECO:0000313|EMBL:AJR02416.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC-SAMT-1.;"
AB_69_bin_160_scaffold_1219_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22336..23007
DNA (672bp) protein (224aa)
GCN5-related N-acetyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQU8_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EEF57805.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
wecD; Acetyltransferase, GNAT family
AB_69_bin_160_scaffold_1219_29
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

24127..24498
DNA (372bp) protein (124aa)
Putative uncharacterized protein PH0221 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O57960_PYRHO
Putative uncharacterized protein PH0221 {ECO:0000313|EMBL:BAA29291.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
AB_69_bin_160_scaffold_1219_trna_2
unknown

Not on your lists

comp(26313..26378)
DNA (66bp)
transferRNA Pseudo
Displaying items 1-30 of 33 in total

View Taxonomy