ggKbase home page

Meg19_1012_Bin_161_scaffold_1430

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_161_scaffold_1430_1
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

1..915
DNA (915bp) protein (305aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Meg19_1012_Bin_161_scaffold_1430_2
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

915..1616
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Aureococcus anophagefferens RepID=F0XXU8_AURAN
S23 ribosomal protein {ECO:0000313|EMBL:KKT92183.1}; TaxID=1618662 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
hypothetical protein
Meg19_1012_Bin_161_scaffold_1430_3

Not on your lists

1613..5779
DNA (4167bp) protein (1389aa)
Nitrous oxidase accessory protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TFB3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN35508.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
periplasmic copper-binding protein
Meg19_1012_Bin_161_scaffold_1430_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5965..7674
DNA (1710bp) protein (570aa)
anthranilate synthase component I (EC:4.1.3.27)
anthranilate synthase component I; K01657 anthranilate synthase component I [EC:4.1.3.27] id=5240918 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_161_scaffold_1430_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7671..8291
DNA (621bp) protein (207aa)
anthranilate synthase / indole-3-glycerol phosphate synthase (EC:4.1.3.27)
AER446Wp; K01656 anthranilate synthase / indole-3-glycerol phosphate synthase [EC:4.1.3.27 4.1.1.48] id=5240919 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_161_scaffold_1430_6

Not on your lists

8284..9300
DNA (1017bp) protein (339aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] id=5240920 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_161_scaffold_1430_7

Not on your lists

9297..10064
DNA (768bp) protein (256aa)
indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase; K13498 indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] id=5240921 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase {ECO:0000313|EMBL:AJF59912.1}; EC=4.1.1.48 {ECO:0000313|EMBL:AJF59912.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_161_scaffold_1430_8
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

10057..10710
DNA (654bp) protein (218aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000313|EMBL:KKU99856.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
N-(5'-phosphoribosyl)anthranilate isomerase id=4305293 bin=GWA2_OP3_52_12 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Meg19_1012_Bin_161_scaffold_1430_9
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10703..11902
DNA (1200bp) protein (400aa)
tryptophan synthase beta chain (EC:4.2.1.20)
tryptophan synthase, beta subunit; K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=5240922 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tryptophan synthase beta chain {ECO:0000313|EMBL:KKR78908.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
Meg19_1012_Bin_161_scaffold_1430_10
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11899..12786
DNA (888bp) protein (296aa)
Tryptophan synthase alpha chain n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SNT3_9EURY
trpA; tryptophan synthase alpha subunit TrpA
Tax=BJP_IG2069_Methanobacteriales_33_27
Meg19_1012_Bin_161_scaffold_1430_11
unknown

Not on your lists

comp(12770..12985)
DNA (216bp) protein (72aa)

This feature has no annotations

Meg19_1012_Bin_161_scaffold_1430_12
unknown

Not on your lists

comp(13099..13494)
DNA (396bp) protein (132aa)

This feature has no annotations

Meg19_1012_Bin_161_scaffold_1430_trna_1
unknown

Not on your lists

13612..13685
DNA (74bp)
transferRNA Ala
Meg19_1012_Bin_161_scaffold_1430_13
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

comp(13716..14339)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3B6_THEGP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
Meg19_1012_Bin_161_scaffold_1430_14
RBG_19FT_COMBO_WWE3_53_11_curated, WWE3, Bacteria

Not on your lists

comp(14399..15502)
DNA (1104bp) protein (368aa)
Uncharacterized protein id=5800207 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
glycogen debranching enzyme
Tax=RBG_19FT_COMBO_WWE3_53_11_curated
Meg19_1012_Bin_161_scaffold_1430_15
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15550..16191
DNA (642bp) protein (214aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:GAM14198.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:GAM14198.1};; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Bacillus sp. 17376 RepID=V6T8Q5_9BACI
Meg19_1012_Bin_161_scaffold_1430_16
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

16198..17526
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMB9_PYRSN
hypothetical protein
Tax=CG_Micra_01
Meg19_1012_Bin_161_scaffold_1430_17
unknown

Not on your lists

17582..17842
DNA (261bp) protein (87aa)

This feature has no annotations

Meg19_1012_Bin_161_scaffold_1430_18

Not on your lists

comp(17843..19651)
DNA (1809bp) protein (603aa)
guaA; GMP synthase glutamine-hydrolysing (EC:6.3.5.2)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=5240972 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
GMP synthase glutamine-hydrolysing {ECO:0000313|EMBL:AJF59963.1}; EC=6.3.5.2 {ECO:0000313|EMBL:AJF59963.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_161_scaffold_1430_19
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(20007..20609)
DNA (603bp) protein (201aa)
Thiamine biosynthesis ATP pyrophosphatase n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJH4_9EURY
Thiamine biosynthesis ATP pyrophosphatase
Thiamine biosynthesis ATP pyrophosphatase {ECO:0000313|EMBL:AGI47195.1}; TaxID=1054217 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
Meg19_1012_Bin_161_scaffold_1430_trna_2
unknown

Not on your lists

20668..20751
DNA (84bp)
transferRNA Ser
Meg19_1012_Bin_161_scaffold_1430_20
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

20784..21329
DNA (546bp) protein (182aa)
Mannose-6-phosphate isomerase id=2373958 bin=GWD1_TM7_39_7 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Tax=RBG_13_OP11_40_7b_curated
Meg19_1012_Bin_161_scaffold_1430_21

Not on your lists

comp(21415..21987)
DNA (573bp) protein (191aa)
Putative membrane protein id=5800671 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62002.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
Meg19_1012_Bin_161_scaffold_1430_22
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(21995..22300)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5M2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25869.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
Meg19_1012_Bin_161_scaffold_1430_23
unknown

Not on your lists

comp(22335..22565)
DNA (231bp) protein (77aa)

This feature has no annotations

Meg19_1012_Bin_161_scaffold_1430_trna_3
unknown

Not on your lists

22620..22703
DNA (84bp)
transferRNA Ser
Meg19_1012_Bin_161_scaffold_1430_24
unknown

Not on your lists

22772..23005
DNA (234bp) protein (78aa)

This feature has no annotations

Meg19_1012_Bin_161_scaffold_1430_trna_4
unknown

Not on your lists

23118..23201
DNA (84bp)
transferRNA Pseudo
Meg19_1012_Bin_161_scaffold_1430_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(23309..23542)
DNA (234bp) protein (78aa)
hypothetical protein
transmembrane_regions id=5241564 bin=GW2011_AR10_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_161_scaffold_1430_26
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

23619..24503
DNA (885bp) protein (295aa)
Histone deacetylase superfamily id=4705374 bin=GWC2_OP3_44_8 species=Methanotorris igneus genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
histone deacetylase superfamily protein
Tax=GWF2_WOR_2_43_52_curated
Displaying items 1-30 of 52 in total

View Taxonomy