ggKbase home page

Meg19_1012_Bin_188_scaffold_21685

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_188_scaffold_21685_1

Not on your lists


3..215
DNA (213bp) protein (71aa)
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS12552.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P
Meg19_1012_Bin_188_scaffold_21685_2
unknown

Not on your lists

217..525
DNA (309bp) protein (103aa)

This feature has no annotations

Meg19_1012_Bin_188_scaffold_21685_3

Not on your lists


522..1283
DNA (762bp) protein (254aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12551.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
Meg19_1012_Bin_188_scaffold_21685_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


1280..1522
DNA (243bp) protein (81aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_188_scaffold_21685_5

Not on your lists


1522..2217
DNA (696bp) protein (232aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12550.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L2
Meg19_1012_Bin_188_scaffold_21685_6

Not on your lists


2219..2629
DNA (411bp) protein (137aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S15e (S19p)
Meg19_1012_Bin_188_scaffold_21685_7

Not on your lists


2631..3323
DNA (693bp) protein (231aa)
50S ribosomal protein L22P n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB23_9ARCH
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22
Meg19_1012_Bin_188_scaffold_21685_8

Not on your lists


3325..4146
DNA (822bp) protein (274aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GWE6_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12547.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
Meg19_1012_Bin_188_scaffold_21685_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4146..4346
DNA (201bp) protein (67aa)
Tax=CG_Pacearch_06
Meg19_1012_Bin_188_scaffold_21685_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4347..4643
DNA (297bp) protein (99aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY
translation initiation factor SUI1
Tax=CG_Pacearch_06
Meg19_1012_Bin_188_scaffold_21685_11

Not on your lists


4670..5008
DNA (339bp) protein (113aa)
30S ribosomal protein S17P n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ACD1_IGNH4
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
Meg19_1012_Bin_188_scaffold_21685_12

Not on your lists


5005..5406
DNA (402bp) protein (134aa)
50S ribosomal protein L14 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL14_NANEQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P
Meg19_1012_Bin_188_scaffold_21685_13
unknown

Not on your lists

5408..5641
DNA (234bp) protein (78aa)

This feature has no annotations

Meg19_1012_Bin_188_scaffold_21685_14

Not on your lists


5638..6105
DNA (468bp) protein (156aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5042312 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L24P
Meg19_1012_Bin_188_scaffold_21685_15
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

6108..6725
DNA (618bp) protein (206aa)
30S ribosomal protein S4e n=1 Tax=nanoarchaeote Nst1 RepID=R1FU02_9ARCH
Tax=CG_Pacearch_02
Meg19_1012_Bin_188_scaffold_21685_16

Not on your lists


6722..7321
DNA (600bp) protein (200aa)
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12543.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5042314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L5
Meg19_1012_Bin_188_scaffold_21685_17
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7324..7554
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5041773 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SSU ribosomal protein S14P
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_188_scaffold_21685_18

Not on your lists


7556..7930
DNA (375bp) protein (125aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12191.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8, small subunit ribosomal protein S8
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5041774 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Meg19_1012_Bin_188_scaffold_21685_19

Not on your lists


7932..8492
DNA (561bp) protein (187aa)
50S ribosomal protein L6 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL6_THEKO
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12542.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6P
Meg19_1012_Bin_188_scaffold_21685_20

Not on your lists


8515..8808
DNA (294bp) protein (98aa)
Ribosomal protein L32E n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACM3_CALLD
50S ribosomal protein L32, large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO55522.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
ribosomal protein L32E
Meg19_1012_Bin_188_scaffold_21685_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

8805..9212
DNA (408bp) protein (136aa)
50S ribosomal protein L19e n=1 Tax=uncultured marine crenarchaeote HF4000_APKG10F15 RepID=B3TBX5_9ARCH
rpl19e; 50S ribosomal protein L19e
Tax=CG_Pacearch_03
Meg19_1012_Bin_188_scaffold_21685_22
unknown

Not on your lists

9209..9406
DNA (198bp) protein (66aa)

This feature has no annotations

Meg19_1012_Bin_188_scaffold_21685_23

Not on your lists


9403..9870
DNA (468bp) protein (156aa)
50S ribosomal protein L18P n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKL6_METP4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18P/L5E
Meg19_1012_Bin_188_scaffold_21685_24
unknown

Not on your lists

9870..10289
DNA (420bp) protein (140aa)

This feature has no annotations

Meg19_1012_Bin_188_scaffold_21685_25
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

10292..10573
DNA (282bp) protein (94aa)
Tax=CG_Pacearch_02
Displaying 25 items

View Taxonomy