ggKbase home page

Meg19_1012_Bin_325_scaffold_17715

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_325_scaffold_17715_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(68..448)
DNA (381bp) protein (127aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8e
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg19_1012_Bin_325_scaffold_17715_2
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(482..2179)
DNA (1698bp) protein (566aa)
PHP domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D244_METSW
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:AEG17910.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
Meg19_1012_Bin_325_scaffold_17715_3

Not on your lists

2285..2512
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367D4C7
Like-Sm ribonucleoprotein core
Like-Sm ribonucleoprotein core {ECO:0000313|EMBL:AJF62365.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_17715_4
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2680..3291)
DNA (612bp) protein (204aa)
Kynurenine formamidase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FV9_METBF
Metal-dependent hydrolase {ECO:0000313|EMBL:AKB21101.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
Metal-dependent hydrolase
Meg19_1012_Bin_325_scaffold_17715_5
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3278..4168)
DNA (891bp) protein (297aa)
6-phosphogluconate dehydrogenase,decarboxylating {ECO:0000313|EMBL:CCJ32808.1}; EC=1.1.1.44 {ECO:0000313|EMBL:CCJ32808.1};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
6-phosphogluconate dehydrogenase,decarboxylating n=1 Tax=Caloramator australicus RC3 RepID=I7KT09_9CLOT
gnd; 6-phosphogluconate dehydrogenase
Meg19_1012_Bin_325_scaffold_17715_6
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4161..5105)
DNA (945bp) protein (315aa)
Glucokinase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLG5_METH6
glucokinase
Glucokinase {ECO:0000313|EMBL:AET64268.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
Meg19_1012_Bin_325_scaffold_17715_trna_1
unknown

Not on your lists

5228..5311
DNA (84bp)
transferRNA Leu
Meg19_1012_Bin_325_scaffold_17715_7
unknown

Not on your lists

5350..5559
DNA (210bp) protein (70aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_17715_8

Not on your lists

comp(5597..11971)
DNA (6375bp) protein (2125aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:AJF62368.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_17715_9

Not on your lists

comp(11968..13896)
DNA (1929bp) protein (643aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_17715_10

Not on your lists

comp(13893..14078)
DNA (186bp) protein (62aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_17715_11
unknown

Not on your lists

comp(14231..15019)
DNA (789bp) protein (263aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_17715_trna_4
unknown

Not on your lists

comp(15091..15162)
DNA (72bp)
transferRNA Val
Meg19_1012_Bin_325_scaffold_17715_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15217..15723
DNA (507bp) protein (169aa)
seg id=5799725 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Meg19_1012_Bin_325_scaffold_17715_trna_3
unknown

Not on your lists

comp(15725..15796)
DNA (72bp)
transferRNA Thr
Meg19_1012_Bin_325_scaffold_17715_13

Not on your lists


comp(15834..16388)
DNA (555bp) protein (185aa)
SSU ribosomal protein S3AE n=1 Tax=nanoarchaeote Nst1 RepID=R1E4Q5_9ARCH id=5103091 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SSU ribosomal protein S3AE
SSU ribosomal protein S3AE {ECO:0000313|EMBL:AJF62372.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_17715_14
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16411..17790)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003699C78
Phosphoesterase, RecJ-like protein
Tax=AR20
Meg19_1012_Bin_325_scaffold_17715_15

Not on your lists


comp(17787..18242)
DNA (456bp) protein (152aa)
30S ribosomal protein S15/S13e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6T6_KORCO id=5103093 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_L03829 {ECO:0000313|EMBL:GAF76633.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S15/S13e
Meg19_1012_Bin_325_scaffold_17715_16
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18341..18607)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ED1D1
Translation elongation factor-like protein
Tax=AR20
Meg19_1012_Bin_325_scaffold_17715_trna_2
unknown

Not on your lists

comp(18646..18718)
DNA (73bp)
transferRNA Gln
Meg19_1012_Bin_325_scaffold_17715_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18760..19332)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Nosema ceranae (strain BRL01) RepID=C4V6R8_NOSCE id=5103153 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_02
Meg19_1012_Bin_325_scaffold_17715_18
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19368..22271)
DNA (2904bp) protein (968aa)
Regulator of chromosome condensation n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMD0_MYXFH
regulator of chromosome condensation
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Displaying 22 items

View Taxonomy