ggKbase home page

Meg19_1012_Bin_405_scaffold_33098

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_405_scaffold_33098_1

Not on your lists


2..700
DNA (699bp) protein (233aa)
50S ribosomal protein L2 n=1 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=RL2_METBU id=5103255 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS11619.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2
Meg19_1012_Bin_405_scaffold_33098_2
unknown

Not on your lists

697..1179
DNA (483bp) protein (161aa)

This feature has no annotations

Meg19_1012_Bin_405_scaffold_33098_3
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists


1181..1576
DNA (396bp) protein (132aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
rps19p; 30S ribosomal protein S19
Tax=AR13
Meg19_1012_Bin_405_scaffold_33098_4

Not on your lists


1577..2200
DNA (624bp) protein (208aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Meg19_1012_Bin_405_scaffold_33098_5

Not on your lists


2296..2403
DNA (108bp) protein (36aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU95_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99759.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Meg19_1012_Bin_405_scaffold_33098_6

Not on your lists


2640..2993
DNA (354bp) protein (118aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GW24_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99760.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
small subunit ribosomal protein S3
Meg19_1012_Bin_405_scaffold_33098_7
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

2995..3204
DNA (210bp) protein (70aa)
Tax=AR13
Meg19_1012_Bin_405_scaffold_33098_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3208..3507
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY
translation factor SUI1-like protein
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_405_scaffold_33098_9

Not on your lists


3534..4013
DNA (480bp) protein (160aa)
30S ribosomal protein S17P n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ACD1_IGNH4
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
Meg19_1012_Bin_405_scaffold_33098_10

Not on your lists


4010..4411
DNA (402bp) protein (134aa)
50S ribosomal protein L14 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL14_NANEQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P
Meg19_1012_Bin_405_scaffold_33098_11

Not on your lists


4413..4838
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl24p; 50S ribosomal protein L24
Meg19_1012_Bin_405_scaffold_33098_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4840..5487
DNA (648bp) protein (216aa)
30S ribosomal protein S4e n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0T3_METPS
rps4e; 30S ribosomal protein S4e
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_405_scaffold_33098_13

Not on your lists


5488..5991
DNA (504bp) protein (168aa)
50S ribosomal protein L5 n=1 Tax=nanoarchaeote Nst1 RepID=R1G3A2_9ARCH
Large subunit ribosomal protein L5 {ECO:0000313|EMBL:KHO55526.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
50S ribosomal protein L5
Meg19_1012_Bin_405_scaffold_33098_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

5993..6223
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003729D23
SSU ribosomal protein S14P
Tax=AR19
Meg19_1012_Bin_405_scaffold_33098_15

Not on your lists


6232..6612
DNA (381bp) protein (127aa)
30S ribosomal protein S8 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS8_NANEQ
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS11627.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps8p; 30S ribosomal protein S8P
Meg19_1012_Bin_405_scaffold_33098_16
unknown

Not on your lists

6614..6853
DNA (240bp) protein (80aa)

This feature has no annotations

Meg19_1012_Bin_405_scaffold_33098_17

Not on your lists


6850..7392
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=5 Tax=Thermococcus RepID=RL6_PYRKO id=5103268 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS11564.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
Meg19_1012_Bin_405_scaffold_33098_18
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

7374..7967
DNA (594bp) protein (198aa)
50S ribosomal protein L32e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQL6_9EURY id=5103269 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L32e
Tax=CG_Pacearch_01
Meg19_1012_Bin_405_scaffold_33098_19

Not on your lists

7964..8371
DNA (408bp) protein (136aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV
Marine sediment metagenome DNA, contig: S12H4_S16718 {ECO:0000313|EMBL:GAJ13137.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L19e
Meg19_1012_Bin_405_scaffold_33098_20

Not on your lists


8368..8856
DNA (489bp) protein (163aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
Meg19_1012_Bin_405_scaffold_33098_21
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


8858..9820
DNA (963bp) protein (321aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_405_scaffold_33098_22
unknown

Not on your lists

9817..10146
DNA (330bp) protein (110aa)

This feature has no annotations

Meg19_1012_Bin_405_scaffold_33098_23

Not on your lists


10143..10832
DNA (690bp) protein (230aa)
50S ribosomal protein L30P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE0_METFV
Marine sediment metagenome DNA, contig: S12H4_L00787 {ECO:0000313|EMBL:GAI80441.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpl30p; 50S ribosomal protein L30
Meg19_1012_Bin_405_scaffold_33098_24

Not on your lists


10834..10986
DNA (153bp) protein (51aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S06H3_L00060 {ECO:0000313|EMBL:GAI17829.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L15P
Meg19_1012_Bin_405_scaffold_33098_25

Not on your lists

11259..12698
DNA (1440bp) protein (480aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Protein translocase subunit SecY
Meg19_1012_Bin_405_scaffold_33098_26

Not on your lists

12882..13280
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO52086.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
Displaying 26 items

View Taxonomy