ggKbase home page

Meg19_1012_Bin_412_scaffold_3675

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_412_scaffold_3675_1
unknown

Not on your lists

3..191
DNA (189bp) protein (63aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

222..635
DNA (414bp) protein (138aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_3
unknown

Not on your lists

677..1288
DNA (612bp) protein (204aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_4

Not on your lists


1311..2633
DNA (1323bp) protein (441aa)
tRNA nucleotidyltransferase CCA-adding enzyme {ECO:0000313|EMBL:KHO50549.1}; EC=2.7.7.72 {ECO:0000313|EMBL:KHO50549.1};; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA nucleotidyltransferase CCA-adding enzyme
Meg19_1012_Bin_412_scaffold_3675_5
unknown

Not on your lists

comp(2625..2948)
DNA (324bp) protein (108aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_6
unknown

Not on your lists

comp(2932..3225)
DNA (294bp) protein (98aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_7
unknown

Not on your lists

comp(3227..3553)
DNA (327bp) protein (109aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3555..4337)
DNA (783bp) protein (261aa)
hypothetical protein id=5044141 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_412_scaffold_3675_9
unknown

Not on your lists

comp(4339..4611)
DNA (273bp) protein (91aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4717..5217
DNA (501bp) protein (167aa)
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
peptidase S26B, signal peptidase
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_412_scaffold_3675_11
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5220..6146)
DNA (927bp) protein (309aa)
hypothetical protein id=5044144 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR13
Meg19_1012_Bin_412_scaffold_3675_12
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6394..8277)
DNA (1884bp) protein (628aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
kh-domain/beta-lactamase-domain-containing protein
Tax=AR13
Meg19_1012_Bin_412_scaffold_3675_13

Not on your lists

comp(8358..9008)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK64624.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Proteasome subunit beta id=5799851 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proteasome subunit beta
Meg19_1012_Bin_412_scaffold_3675_14
unknown

Not on your lists

9175..9501
DNA (327bp) protein (109aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_15
unknown

Not on your lists

9498..9725
DNA (228bp) protein (76aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_16
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9722..11770)
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A0D51
SMC protein
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_412_scaffold_3675_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11779..12987)
DNA (1209bp) protein (403aa)
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_18
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

13112..14029
DNA (918bp) protein (306aa)
Membrane-bound lytic murein transglycosylase n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EY24_DICNV
membrane-bound lytic murein transglycosylase
Tax=CG_Elusi_05
Meg19_1012_Bin_412_scaffold_3675_19
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(14026..14571)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369A627
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_20

Not on your lists

comp(14574..15326)
DNA (753bp) protein (251aa)
PREDICTED: uncharacterized protein LOC580818 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0002652EC5
Uncharacterized protein {ECO:0000313|EMBL:KKL67951.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_412_scaffold_3675_21
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(15328..16707)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
RNA-metabolising metallo-beta-lactamase
Tax=CG_Pacearch_01
Meg19_1012_Bin_412_scaffold_3675_22
GWF2_TM6_32_72, TM6, Bacteria

Not on your lists

16802..18229
DNA (1428bp) protein (476aa)
AMMECR1 domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJH3_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KKP35403.1}; TaxID=1619079 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_32_72.;"
AMMECR1 domain-containing protein
Meg19_1012_Bin_412_scaffold_3675_23

Not on your lists

18260..18538
DNA (279bp) protein (93aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 {ECO:0000313|EMBL:GAI25822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_412_scaffold_3675_24
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

18990..19742
DNA (753bp) protein (251aa)
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha
Tax=AR13
Meg19_1012_Bin_412_scaffold_3675_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


19739..20419
DNA (681bp) protein (227aa)
Ribosome maturation protein SBDS-like protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8G6_METEZ
ribosome maturation protein SBDS-like protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_26
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

20409..21083
DNA (675bp) protein (225aa)
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative exosome complex RNA-binding protein 1
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_27
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

21073..21783
DNA (711bp) protein (237aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease Rrp41
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_28
unknown

Not on your lists

21788..22081
DNA (294bp) protein (98aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_3675_29
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

22074..22874
DNA (801bp) protein (267aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA-processing protein RRP42
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_3675_30

Not on your lists

22897..23268
DNA (372bp) protein (124aa)
UPI000021CFC7 related cluster n=1 Tax=unknown RepID=UPI000021CFC7 id=5103847 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO52901.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
Displaying items 1-30 of 40 in total

View Taxonomy