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Meg19_1012_Bin_412_scaffold_12947

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_412_scaffold_12947_1
AR13, Pacearchaeaota, DPANN, Archaea

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300..560
DNA (261bp) protein (87aa)
hypothetical protein
Tax=AR13
Meg19_1012_Bin_412_scaffold_12947_2

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comp(553..1596)
DNA (1044bp) protein (348aa)
Marine sediment metagenome DNA, contig: S12H4_S14069 {ECO:0000313|EMBL:GAJ13157.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_412_scaffold_12947_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(1663..1860)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1983..2672
DNA (690bp) protein (230aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUY6_9BACT id=5103795 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transport system protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_412_scaffold_12947_5
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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2695..3543
DNA (849bp) protein (283aa)
hypothetical protein
id=5103794 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_412_scaffold_12947_6
CG_Pacearch_04, Pacearchaeota, Archaea

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3548..4759
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Methanococcus maripaludis RepID=A4FZ02_METM5 id=5103793 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_04
Meg19_1012_Bin_412_scaffold_12947_7

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4833..5033
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL64657.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_412_scaffold_12947_8

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5068..5361
DNA (294bp) protein (98aa)
50S ribosomal protein L21e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL21_METKA
Uncharacterized protein {ECO:0000313|EMBL:KKL64656.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribosomal protein L21e
Meg19_1012_Bin_412_scaffold_12947_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5348..5653
DNA (306bp) protein (102aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5659..6198
DNA (540bp) protein (180aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_11
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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6204..6677
DNA (474bp) protein (158aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_12
CG_Pacearch_01, Pacearchaeota, Archaea

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6674..7192
DNA (519bp) protein (173aa)
30S ribosomal protein S4 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VS30_9EURY
30S ribosomal protein S4P
Tax=CG_Pacearch_01
Meg19_1012_Bin_412_scaffold_12947_13

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7185..7679
DNA (495bp) protein (165aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus zilligii RepID=UPI000299D2B8
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
30S ribosomal protein S11P
Meg19_1012_Bin_412_scaffold_12947_14
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7704..8414
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_15
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8450..9331
DNA (882bp) protein (294aa)
Sodium bile acid symporter family protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1P8J5_9FLAO
Sodium bile acid symporter family protein {ECO:0000313|EMBL:EKY11762.1}; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 326 str. F0382.;"
bile acid:sodium symporter
Meg19_1012_Bin_412_scaffold_12947_trna_1
unknown

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9508..9591
DNA (84bp)
transferRNA Leu
Meg19_1012_Bin_412_scaffold_12947_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


9682..10056
DNA (375bp) protein (125aa)
50S ribosomal protein L18e n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SK91_9EURY
ribosomal protein L18e Rpl18e
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


10050..10451
DNA (402bp) protein (134aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13P
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_412_scaffold_12947_18

Not on your lists


10441..10845
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
Marine sediment metagenome DNA, contig: S03H2_S00319 {ECO:0000313|EMBL:GAH52189.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S9
Meg19_1012_Bin_412_scaffold_12947_19

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comp(10882..11292)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382DD02
Marine sediment metagenome DNA, contig: S06H3_L03780 {ECO:0000313|EMBL:GAI16792.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
INT
Meg19_1012_Bin_412_scaffold_12947_20

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comp(11294..12121)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
Uncharacterized protein {ECO:0000313|EMBL:KHO48755.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
integrase family protein
Meg19_1012_Bin_412_scaffold_12947_21

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comp(12118..12753)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3UQ71_MOUSE
Uncharacterized protein {ECO:0000313|EMBL:KHO55555.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
Meg19_1012_Bin_412_scaffold_12947_22

Not on your lists

12903..13232
DNA (330bp) protein (110aa)
Marine sediment metagenome DNA, contig: S12H4_L00024 {ECO:0000313|EMBL:GAI85214.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA-binding protein RNP-2 id=15188550 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
RNA-binding protein
Meg19_1012_Bin_412_scaffold_12947_23
unknown

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comp(13248..13391)
DNA (144bp) protein (48aa)

This feature has no annotations

Meg19_1012_Bin_412_scaffold_12947_24
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

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comp(13388..13798)
DNA (411bp) protein (137aa)
seg id=5803386 bin=OD1_GWC2_34_28 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP76728.1}; TaxID=1618629 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
Displaying 25 items

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