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Meg19_1012_Bin_43_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_43_scaffold_29_1
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

76..519
DNA (444bp) protein (148aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
Meg19_1012_Bin_43_scaffold_29_2
unknown

Not on your lists

comp(555..1034)
DNA (480bp) protein (160aa)

This feature has no annotations

Meg19_1012_Bin_43_scaffold_29_3

Not on your lists


comp(1036..1608)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
Marine sediment metagenome DNA, contig: S03H2_S23408 {ECO:0000313|EMBL:GAH85563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SSU ribosomal protein S3AE
Meg19_1012_Bin_43_scaffold_29_4
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1611..1928)
DNA (318bp) protein (106aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E
Tax=AR13
Meg19_1012_Bin_43_scaffold_29_trna_12
unknown

Not on your lists

comp(2058..2169)
DNA (112bp)
transferRNA Val
Meg19_1012_Bin_43_scaffold_29_5
unknown

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2231..2425
DNA (195bp) protein (65aa)

This feature has no annotations

Meg19_1012_Bin_43_scaffold_29_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2545..2736
DNA (192bp) protein (64aa)
Tax=CG_Pacearch_06
Meg19_1012_Bin_43_scaffold_29_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2721..4553
DNA (1833bp) protein (611aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_43_scaffold_29_8

Not on your lists

4550..10984
DNA (6435bp) protein (2145aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO48590.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Lytic murein transglycosylase
Meg19_1012_Bin_43_scaffold_29_trna_1
unknown

Not on your lists

11028..11111
DNA (84bp)
transferRNA Leu
Meg19_1012_Bin_43_scaffold_29_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11126..12052)
DNA (927bp) protein (309aa)
Transcription initiation factor IIB id=5799701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription initiation factor IIB
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_43_scaffold_29_10

Not on your lists

comp(12167..12535)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365E5D7
Uncharacterized protein {ECO:0000313|EMBL:KKK90175.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S8e
Meg19_1012_Bin_43_scaffold_29_11
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12712..12963
DNA (252bp) protein (84aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY id=5103084 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Like-Sm ribonucleoprotein core
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_43_scaffold_29_12

Not on your lists

13054..13956
DNA (903bp) protein (301aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
Meg19_1012_Bin_43_scaffold_29_13
unknown

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13991..14260
DNA (270bp) protein (90aa)

This feature has no annotations

Meg19_1012_Bin_43_scaffold_29_trna_2
unknown

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14358..14449
DNA (92bp)
transferRNA Arg
Meg19_1012_Bin_43_scaffold_29_trna_3
unknown

Not on your lists

14512..14649
DNA (138bp)
transferRNA Cys
Meg19_1012_Bin_43_scaffold_29_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(14663..15454)
DNA (792bp) protein (264aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_43_scaffold_29_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

15536..18424
DNA (2889bp) protein (963aa)
psp3; putative alkaline protease id=18248412 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_43_scaffold_29_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


18461..20110
DNA (1650bp) protein (550aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
Meg19_1012_Bin_43_scaffold_29_17

Not on your lists

20201..20386
DNA (186bp) protein (62aa)
UBE4A protein (Fragment) n=1 Tax=Homo sapiens RepID=Q05BZ7_HUMAN
Marine sediment metagenome DNA, contig: S12H4_S24778 {ECO:0000313|EMBL:GAJ18434.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_43_scaffold_29_18

Not on your lists

20467..20835
DNA (369bp) protein (123aa)
histidine triad (HIT) protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B648EF
Marine sediment metagenome DNA, contig: S12H4_L04919 {ECO:0000313|EMBL:GAI81826.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hit; diadenosine tetraphosphate
Meg19_1012_Bin_43_scaffold_29_19
unknown

Not on your lists

20904..21239
DNA (336bp) protein (112aa)

This feature has no annotations

Meg19_1012_Bin_43_scaffold_29_trna_11
unknown

Not on your lists

comp(21380..21509)
DNA (130bp)
transferRNA Met
Meg19_1012_Bin_43_scaffold_29_20

Not on your lists

comp(21562..21771)
DNA (210bp) protein (70aa)
Marine sediment metagenome DNA, contig: S03H2_S02065 {ECO:0000313|EMBL:GAH57225.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_43_scaffold_29_21

Not on your lists

comp(21806..22681)
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51986.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Meg19_1012_Bin_43_scaffold_29_22
unknown

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comp(22729..23043)
DNA (315bp) protein (105aa)

This feature has no annotations

Meg19_1012_Bin_43_scaffold_29_23
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(23040..23558)
DNA (519bp) protein (173aa)
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_43_scaffold_29_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


23611..26058
DNA (2448bp) protein (816aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5049673 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Leucine-tRNA ligase
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_43_scaffold_29_25
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26124..27695
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B528E0
Peptidase C1A, papain, putative
Tax=BJP_IG2069_Syntrophobacterales_46_30
Displaying items 1-30 of 190 in total

View Taxonomy