ggKbase home page

Meg19_1012_Bin_451_scaffold_8723

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_451_scaffold_8723_1
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..740)
DNA (738bp) protein (246aa)
Tat pathway signal sequence domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L1S5_9ACTO
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EKX66573.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
Meg19_1012_Bin_451_scaffold_8723_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(795..1526)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8U5_METMS id=5103711 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_05
Meg19_1012_Bin_451_scaffold_8723_3
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1546..2163)
DNA (618bp) protein (206aa)
hypothetical protein id=5049665 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR1
Meg19_1012_Bin_451_scaffold_8723_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2298..2498
DNA (201bp) protein (67aa)
Tax=CG_Pacearch_06
Meg19_1012_Bin_451_scaffold_8723_5

Not on your lists

comp(2569..3189)
DNA (621bp) protein (207aa)
Uncharacterized membrane protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BKM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO54833.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
integral membrane protein
Meg19_1012_Bin_451_scaffold_8723_6
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(3194..3874)
DNA (681bp) protein (227aa)
Rhomboid family protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ59_9EURY
rhomboid family protein
Tax=CG_Pacearch_02
Meg19_1012_Bin_451_scaffold_8723_7
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(3876..4658)
DNA (783bp) protein (261aa)
Transcription factor E n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HND9_PYRSN id=5102919 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription factor E
Tax=CG_Pacearch_05
Meg19_1012_Bin_451_scaffold_8723_8
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

4805..5356
DNA (552bp) protein (184aa)
vmp22; metalloproteinase, extracellular matrix glycoprotein VMP22 id=5041865 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR1
Meg19_1012_Bin_451_scaffold_8723_9
unknown

Not on your lists

5363..5746
DNA (384bp) protein (128aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_10
unknown

Not on your lists

5776..6120
DNA (345bp) protein (115aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_11
unknown

Not on your lists

6122..6370
DNA (249bp) protein (83aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_12

Not on your lists


6488..8071
DNA (1584bp) protein (528aa)
Alanyl-tRNA synthetase {ECO:0000313|EMBL:KHO54826.1}; EC=6.1.1.7 {ECO:0000313|EMBL:KHO54826.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Alanine--tRNA ligase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XSQ5_9CLOT
Alanine-tRNA ligase
Meg19_1012_Bin_451_scaffold_8723_13
unknown

Not on your lists

8102..8245
DNA (144bp) protein (48aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_14
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(8255..10741)
DNA (2487bp) protein (829aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5049673 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Leucine-tRNA ligase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_451_scaffold_8723_15
unknown

Not on your lists

comp(10743..11015)
DNA (273bp) protein (91aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_16
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

11330..11914
DNA (585bp) protein (195aa)
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
Tax=CG_Pacearch_05
Meg19_1012_Bin_451_scaffold_8723_17
unknown

Not on your lists

11949..12377
DNA (429bp) protein (143aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

12426..13322
DNA (897bp) protein (299aa)
hypothetical protein
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_03
Meg19_1012_Bin_451_scaffold_8723_19

Not on your lists

13370..13609
DNA (240bp) protein (80aa)
30S ribosomal protein S17e n=5 Tax=Thermococcus RepID=RS17E_PYRKO id=5103051 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_451_scaffold_8723_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13627..13965
DNA (339bp) protein (113aa)
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5044188 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA/RNA-binding protein Alba
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_451_scaffold_8723_21
unknown

Not on your lists

14270..14437
DNA (168bp) protein (56aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_22
unknown

Not on your lists

comp(14460..14687)
DNA (228bp) protein (76aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_trna_1
unknown

Not on your lists

14790..14861
DNA (72bp)
transferRNA Met
Meg19_1012_Bin_451_scaffold_8723_23
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(14866..15231)
DNA (366bp) protein (122aa)
Putative histidine triad (HIT) protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2G8P2_DESGI
putative histidine triad (HIT) protein
Tax=CG_Pacearch_05
Meg19_1012_Bin_451_scaffold_8723_24
unknown

Not on your lists

comp(15328..15513)
DNA (186bp) protein (62aa)

This feature has no annotations

Meg19_1012_Bin_451_scaffold_8723_25
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(15644..17335)
DNA (1692bp) protein (564aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Pacearch_06
Meg19_1012_Bin_451_scaffold_8723_26
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(17387..20092)
DNA (2706bp) protein (902aa)
BNR/Asp-box repeat protein id=3886866 bin=GWF2_Ignavibacteria_35_20 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=CG_Pacearch_03
Meg19_1012_Bin_451_scaffold_8723_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

20110..20898
DNA (789bp) protein (263aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_451_scaffold_8723_trna_2
unknown

Not on your lists

20939..21011
DNA (73bp)
transferRNA Cys
Meg19_1012_Bin_451_scaffold_8723_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21011..22108)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IRE2_9PLAN
hypothetical protein
Tax=CG_Woesearch_02
Displaying items 1-30 of 42 in total

View Taxonomy