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Meg19_1012_Bin_460_scaffold_1048

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_460_scaffold_1048_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..222
DNA (222bp) protein (74aa)
UPI0003D66C68 related cluster n=1 Tax=unknown RepID=UPI0003D66C68
Uncharacterized protein {ECO:0000313|EMBL:ETI89678.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
VanZ family protein
Meg19_1012_Bin_460_scaffold_1048_2
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(366..728)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_03
Meg19_1012_Bin_460_scaffold_1048_3
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(954..2330)
DNA (1377bp) protein (459aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Tax=AR19
Meg19_1012_Bin_460_scaffold_1048_4

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comp(2449..3039)
DNA (591bp) protein (197aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
Meg19_1012_Bin_460_scaffold_1048_5

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comp(3175..3648)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48868.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5042322 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L7e (L30p)
Meg19_1012_Bin_460_scaffold_1048_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3709..4002)
DNA (294bp) protein (98aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=SUI1_METJA
translation initiation factor Sui1
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_460_scaffold_1048_7
unknown

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comp(4007..4207)
DNA (201bp) protein (67aa)

This feature has no annotations

Meg19_1012_Bin_460_scaffold_1048_8

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comp(4232..5020)
DNA (789bp) protein (263aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GW24_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12771.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
Meg19_1012_Bin_460_scaffold_1048_9
unknown

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comp(5001..5156)
DNA (156bp) protein (52aa)

This feature has no annotations

Meg19_1012_Bin_460_scaffold_1048_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(5120..5854)
DNA (735bp) protein (245aa)
30S ribosomal protein S5 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036370A2
30S ribosomal protein S5
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_460_scaffold_1048_11

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comp(5856..6485)
DNA (630bp) protein (210aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
Meg19_1012_Bin_460_scaffold_1048_12

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comp(6594..7163)
DNA (570bp) protein (190aa)
50S ribosomal protein L19e n=1 Tax=uncultured marine crenarchaeote HF4000_APKG10F15 RepID=B3TBX5_9ARCH
Marine sediment metagenome DNA, contig: S12H4_S16718 {ECO:0000313|EMBL:GAJ13137.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L19e
Meg19_1012_Bin_460_scaffold_1048_13
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(7203..7835)
DNA (633bp) protein (211aa)
50S ribosomal protein L32e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQL6_9EURY id=5103269 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L32e
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg19_1012_Bin_460_scaffold_1048_14

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comp(7933..8499)
DNA (567bp) protein (189aa)
50S ribosomal protein L6 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM73_METOI
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12769.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
Meg19_1012_Bin_460_scaffold_1048_15

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comp(8534..8905)
DNA (372bp) protein (124aa)
30S ribosomal protein S8 n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDC8_THEC1
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12768.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
Meg19_1012_Bin_460_scaffold_1048_16
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(8907..9137)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003729D23
SSU ribosomal protein S14P
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_460_scaffold_1048_17

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comp(9134..9802)
DNA (669bp) protein (223aa)
50S ribosomal protein L5 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CFB8D
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12767.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
Meg19_1012_Bin_460_scaffold_1048_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9804..10454)
DNA (651bp) protein (217aa)
30S ribosomal protein S4e id=5800051 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S4e
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_460_scaffold_1048_19

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comp(10456..10905)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24
Meg19_1012_Bin_460_scaffold_1048_20

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comp(10944..11345)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL14_NANEQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P
Meg19_1012_Bin_460_scaffold_1048_21

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comp(11342..11665)
DNA (324bp) protein (108aa)
30S ribosomal protein S17P n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSU2_ARCVS
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
Meg19_1012_Bin_460_scaffold_1048_22

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comp(11671..12354)
DNA (684bp) protein (228aa)
50S ribosomal protein L22P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL22_NANEQ id=5103257 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P
Meg19_1012_Bin_460_scaffold_1048_23

Not on your lists


comp(12356..12745)
DNA (390bp) protein (130aa)
30S ribosomal protein S19 n=1 Tax=Thermococcus zilligii RepID=UPI00029A6AB9
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19
Meg19_1012_Bin_460_scaffold_1048_24

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comp(12862..13569)
DNA (708bp) protein (236aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12762.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L2
Meg19_1012_Bin_460_scaffold_1048_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(13675..13917)
DNA (243bp) protein (81aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_460_scaffold_1048_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(13914..14810)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E203C
50S ribosomal protein L4
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_460_scaffold_1048_27

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comp(14807..15757)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037EA6E5
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS11923.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
Meg19_1012_Bin_460_scaffold_1048_28
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(16034..16759)
DNA (726bp) protein (242aa)
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Pacearch_01
Meg19_1012_Bin_460_scaffold_1048_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

17146..18285
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_460_scaffold_1048_30
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18529..20010
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038087F2
AMP phosphohydrolase
Tax=RBG_13_Pacearchaeota_33_26_curated
Displaying items 1-30 of 70 in total

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