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Meg19_1012_Bin_465_scaffold_21728

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_465_scaffold_21728_1

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1..294
DNA (294bp) protein (98aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5046843 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps19p; 30S ribosomal protein S19
Meg19_1012_Bin_465_scaffold_21728_2

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296..880
DNA (585bp) protein (195aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5041764 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl22p; 50S ribosomal protein L22
Meg19_1012_Bin_465_scaffold_21728_3

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882..1211
DNA (330bp) protein (110aa)
30S ribosomal protein S17P n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSU2_ARCVS
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
Meg19_1012_Bin_465_scaffold_21728_4
unknown

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1208..1534
DNA (327bp) protein (109aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_5

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1536..1937
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14P
Meg19_1012_Bin_465_scaffold_21728_6

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1942..2421
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
Meg19_1012_Bin_465_scaffold_21728_7
CG_Pacearch_05, Pacearchaeota, Archaea

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2399..3055
DNA (657bp) protein (219aa)
30S ribosomal protein S4e n=1 Tax=nanoarchaeote Nst1 RepID=R1FU02_9ARCH
ribosomal protein S4E, central domain protein
Tax=CG_Pacearch_05
Meg19_1012_Bin_465_scaffold_21728_8

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3057..3611
DNA (555bp) protein (185aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12767.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
Meg19_1012_Bin_465_scaffold_21728_9
unknown

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3613..3837
DNA (225bp) protein (75aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_10
unknown

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4077..4250
DNA (174bp) protein (58aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_11

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4253..4624
DNA (372bp) protein (124aa)
30S ribosomal protein S8 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXV7_9EURY
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12768.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
Meg19_1012_Bin_465_scaffold_21728_12

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4673..5227
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD84_METIK
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12769.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
Meg19_1012_Bin_465_scaffold_21728_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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5230..5865
DNA (636bp) protein (212aa)
50S ribosomal protein L32e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQL6_9EURY id=5103269 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L32e
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_465_scaffold_21728_14

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5868..6380
DNA (513bp) protein (171aa)
50S ribosomal protein L19e n=2 Tax=Methanothermobacter RepID=D9PV58_METTM
Marine sediment metagenome DNA, contig: S12H4_S16718 {ECO:0000313|EMBL:GAJ13137.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpl19e; 50S ribosomal protein L19e
Meg19_1012_Bin_465_scaffold_21728_15

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6487..7020
DNA (534bp) protein (178aa)
50S ribosomal protein L18P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV1_FERPA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
Meg19_1012_Bin_465_scaffold_21728_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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7022..7729
DNA (708bp) protein (236aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_465_scaffold_21728_17
unknown

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7731..7964
DNA (234bp) protein (78aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_18

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7968..8660
DNA (693bp) protein (231aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GT23_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12771.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
Meg19_1012_Bin_465_scaffold_21728_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8808..9011
DNA (204bp) protein (68aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_465_scaffold_21728_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9016..9315
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM65_METOI
translation factor SUI1-like protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_465_scaffold_21728_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9427..9867
DNA (441bp) protein (147aa)
50S ribosomal protein L30P n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XT59_9CREN
50S ribosomal protein L30
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_465_scaffold_21728_22
unknown

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9869..10120
DNA (252bp) protein (84aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_23

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10124..10585
DNA (462bp) protein (154aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
Meg19_1012_Bin_465_scaffold_21728_24
AR19, Pacearchaeaota, DPANN, Archaea

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10635..12029
DNA (1395bp) protein (465aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Tax=AR19
Meg19_1012_Bin_465_scaffold_21728_25
CG_Pacearch_03, Pacearchaeota, Archaea

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12315..12719
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362FD74
hypothetical protein
Tax=CG_Pacearch_03
Meg19_1012_Bin_465_scaffold_21728_26
unknown

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comp(12812..13663)
DNA (852bp) protein (284aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_27
unknown

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comp(13774..14190)
DNA (417bp) protein (139aa)

This feature has no annotations

Meg19_1012_Bin_465_scaffold_21728_28
unknown

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comp(14193..14396)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 28 items

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