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Meg19_1012_Bin_505_scaffold_353

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_505_scaffold_353_trna_4
unknown

Not on your lists

comp(387..461)
DNA (75bp)
transferRNA Met
Meg19_1012_Bin_505_scaffold_353_1

Not on your lists

comp(639..1166)
DNA (528bp) protein (176aa)
transcription initiation factor TFIIE subunit alpha
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5241571 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_505_scaffold_353_2

Not on your lists

comp(1197..1739)
DNA (543bp) protein (181aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=5040651 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
Meg19_1012_Bin_505_scaffold_353_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1792..3078
DNA (1287bp) protein (429aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5241573 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_trna_1
unknown

Not on your lists

3220..3292
DNA (73bp)
transferRNA Lys
Meg19_1012_Bin_505_scaffold_353_trna_2
unknown

Not on your lists

3413..3485
DNA (73bp)
transferRNA Lys
Meg19_1012_Bin_505_scaffold_353_4
unknown

Not on your lists

3645..3800
DNA (156bp) protein (52aa)

This feature has no annotations

Meg19_1012_Bin_505_scaffold_353_5
unknown

Not on your lists

3849..4385
DNA (537bp) protein (179aa)

This feature has no annotations

Meg19_1012_Bin_505_scaffold_353_6

Not on your lists

4608..5894
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthase (EC:6.3.4.4)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] id=5240826 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_505_scaffold_353_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(5891..7228)
DNA (1338bp) protein (446aa)
Adenylosuccinate lyase id=5799536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
purB; adenylosuccinate lyase
Tax=CG_Aenigma_01
Meg19_1012_Bin_505_scaffold_353_8

Not on your lists

7344..8768
DNA (1425bp) protein (475aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=16793533 bin=RBG_16_Aminicenantes_63_16_plus species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Uncharacterized protein {ECO:0000313|EMBL:KKN25122.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_505_scaffold_353_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

8800..9765
DNA (966bp) protein (322aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=5240828 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_10
unknown

Not on your lists

comp(9766..10122)
DNA (357bp) protein (119aa)

This feature has no annotations

Meg19_1012_Bin_505_scaffold_353_11
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10194..10574
DNA (381bp) protein (127aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZM04_THELI
N5-carboxyaminoimidazole ribonucleotide mutase
Meg19_1012_Bin_505_scaffold_353_12
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

10656..12185
DNA (1530bp) protein (510aa)
rmr:Rmar_0677 GMP synthase, large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=36187 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
GMP synthase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Meg19_1012_Bin_505_scaffold_353_13
unknown

Not on your lists

12219..12452
DNA (234bp) protein (78aa)

This feature has no annotations

Meg19_1012_Bin_505_scaffold_353_14

Not on your lists

comp(12540..14147)
DNA (1608bp) protein (536aa)
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5241588 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_505_scaffold_353_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(14203..14946)
DNA (744bp) protein (248aa)
hypothetical protein
hypothetical protein id=5241590 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(15013..16839)
DNA (1827bp) protein (609aa)
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9Z8_CARHZ id=5102885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
GTP pyrophosphokinase
Tax=CG_Woesearch_01
Meg19_1012_Bin_505_scaffold_353_17
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

16928..17629
DNA (702bp) protein (234aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
triosephosphate isomerase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B311E9
Meg19_1012_Bin_505_scaffold_353_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(17665..18123)
DNA (459bp) protein (153aa)
hypothetical protein
transmembrane_regions id=5241501 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_19

Not on your lists

comp(18196..19128)
DNA (933bp) protein (311aa)
archaeal flagellar protein FlaJ
type ii secretion system f domain protein; K07333 archaeal flagellar protein FlaJ id=5241502 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Archaeal flagellar protein FlaJ {ECO:0000313|EMBL:AJF60493.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_505_scaffold_353_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(19197..20066)
DNA (870bp) protein (290aa)
hypothetical protein
hypothetical protein; K07333 archaeal flagellar protein FlaJ id=5241503 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(20087..21814)
DNA (1728bp) protein (576aa)
archaeal flagellar protein FlaI
secretory protein kinase; K07332 archaeal flagellar protein FlaI id=5241504 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_22
unknown

Not on your lists

21933..22286
DNA (354bp) protein (118aa)

This feature has no annotations

Meg19_1012_Bin_505_scaffold_353_23

Not on your lists

comp(22479..23354)
DNA (876bp) protein (292aa)
hypothetical protein
transmembrane_regions id=5241505 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60496.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_505_scaffold_353_24

Not on your lists

comp(23351..23776)
DNA (426bp) protein (142aa)
hypothetical protein
transmembrane_regions id=5241506 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60497.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_505_scaffold_353_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(23773..24267)
DNA (495bp) protein (165aa)
hypothetical protein
transmembrane_regions id=5241507 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_505_scaffold_353_26
unknown

Not on your lists

comp(24254..24637)
DNA (384bp) protein (128aa)
hypothetical protein
Meg19_1012_Bin_505_scaffold_353_27
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(24649..27156)
DNA (2508bp) protein (836aa)
id=5048008 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Chloroflexi_52_12_curated
Displaying items 1-30 of 79 in total

View Taxonomy