ggKbase home page

Meg19_1012_Bin_507_scaffold_21602

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_507_scaffold_21602_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(42..473)
DNA (432bp) protein (144aa)
Transcriptional regulator, AsnC family n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RW48_THEPD
AsnC family transcriptional regulator
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg19_1012_Bin_507_scaffold_21602_2
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


590..1069
DNA (480bp) protein (160aa)
30S ribosomal protein S13 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE9_METFV
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Meg19_1012_Bin_507_scaffold_21602_3
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


1071..1541
DNA (471bp) protein (157aa)
30S ribosomal protein S4 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ21_PYRSN
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
Meg19_1012_Bin_507_scaffold_21602_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


1542..1952
DNA (411bp) protein (137aa)
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S11
Tax=CG_Woesearch_03
Meg19_1012_Bin_507_scaffold_21602_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

1949..2749
DNA (801bp) protein (267aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase (EC:2.7.7.6)
Tax=CG_Woesearch_01
Meg19_1012_Bin_507_scaffold_21602_trna_1
unknown

Not on your lists

2750..2833
DNA (84bp)
transferRNA Leu
Meg19_1012_Bin_507_scaffold_21602_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


2859..3212
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037805E2
50S ribosomal protein L18e
Tax=CG_Woesearch_02
Meg19_1012_Bin_507_scaffold_21602_7
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


3209..3631
DNA (423bp) protein (141aa)
50S ribosomal protein L13 n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YSQ5_THEON
rpl13p; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (strain NA1).;"
Meg19_1012_Bin_507_scaffold_21602_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


3610..4032
DNA (423bp) protein (141aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
30S ribosomal protein S9
Tax=CG_Woesearch_02
Meg19_1012_Bin_507_scaffold_21602_9
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


4043..4240
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=CG_Pacearch_04
Meg19_1012_Bin_507_scaffold_21602_trna_2
unknown

Not on your lists

4258..4330
DNA (73bp)
transferRNA Pro
Meg19_1012_Bin_507_scaffold_21602_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

4376..4591
DNA (216bp) protein (72aa)
50S ribosomal protein L37Ae n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL37A_METKA
rpl37ae; 50S ribosomal protein L37
Tax=CG_Aenigma_01
Meg19_1012_Bin_507_scaffold_21602_11
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

4595..4732
DNA (138bp) protein (46aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
DNA-directed RNA polymerase subunit P n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9F4_METFA
DNA-directed RNA polymerase, subunit P
Meg19_1012_Bin_507_scaffold_21602_12
unknown

Not on your lists

4729..4962
DNA (234bp) protein (78aa)

This feature has no annotations

Meg19_1012_Bin_507_scaffold_21602_13
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

4971..5306
DNA (336bp) protein (112aa)
prefoldin subunit beta n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00035F73FE
Prefoldin subunit beta
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1).;"
Meg19_1012_Bin_507_scaffold_21602_14
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

5313..5549
DNA (237bp) protein (79aa)
UPF0147 protein Mvol_0996 n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DU43_METV3
hypothetical protein
UPF0147 protein Mvol_0996 {ECO:0000256|HAMAP-Rule:MF_00342}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
Meg19_1012_Bin_507_scaffold_21602_15

Not on your lists

5624..6043
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51871.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein; K09152 hypothetical protein id=5050958 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Meg19_1012_Bin_507_scaffold_21602_16
unknown

Not on your lists

6165..6962
DNA (798bp) protein (266aa)

This feature has no annotations

Meg19_1012_Bin_507_scaffold_21602_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6959..7744)
DNA (786bp) protein (262aa)
hypothetical protein id=5044144 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
Meg19_1012_Bin_507_scaffold_21602_18
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(7741..8553)
DNA (813bp) protein (271aa)
phosphoesterase (EC:3.1.-.-); K07096 id=18316202 bin=Nanosalinarum tax=Nanosalinarum
Putative phosphoesterase, Icc family {ECO:0000313|EMBL:EGQ39971.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
metallophosphoesterase
Meg19_1012_Bin_507_scaffold_21602_19
unknown

Not on your lists

8624..9079
DNA (456bp) protein (152aa)

This feature has no annotations

Meg19_1012_Bin_507_scaffold_21602_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(9071..9988)
DNA (918bp) protein (306aa)
magnesium transporter
Mg2 transporter protein CorA family protein; K03284 magnesium transporter id=5240870 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_507_scaffold_21602_21
unknown

Not on your lists

comp(10044..10289)
DNA (246bp) protein (82aa)

This feature has no annotations

Meg19_1012_Bin_507_scaffold_21602_22
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10354..10596
DNA (243bp) protein (81aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
Threonine--tRNA ligase n=1 Tax=Ralstonia sp. PBA RepID=I9KTW8_9RALS
thrS; threonyl-tRNA synthetase
Displaying 24 items

View Taxonomy