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Meg22_1012_Bin_201_scaffold_1289

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_201_scaffold_1289_1
AR13, Pacearchaeaota, DPANN, Archaea

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comp(1..183)
DNA (183bp) protein (61aa)
Protein translocase subunit SecE n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VR11_9EURY
protein translocase SEC61 complex, gamma subunit
Tax=AR13
Meg22_1012_Bin_201_scaffold_1289_2

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comp(233..1348)
DNA (1116bp) protein (372aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Cell division protein FtsZ
Meg22_1012_Bin_201_scaffold_1289_3

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comp(1656..2294)
DNA (639bp) protein (213aa)
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
FKBP-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EFK97890.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Peptidyl-prolyl cis-trans isomerase
Meg22_1012_Bin_201_scaffold_1289_4

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2344..2736
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
Translation initiation factor 5A {ECO:0000313|EMBL:EFK97888.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Translation initiation factor 5A
Meg22_1012_Bin_201_scaffold_1289_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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2805..2969
DNA (165bp) protein (55aa)
hypothetical protein
id=5103024 bin=GW2011_AR20_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1289_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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2982..4391
DNA (1410bp) protein (470aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidase M50
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1289_7
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4458..4574
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GER6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM75649.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
Meg22_1012_Bin_201_scaffold_1289_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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4648..5646
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVS2_THEON
tRNA-modifying protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1289_9
unknown

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comp(5643..6005)
DNA (363bp) protein (121aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1289_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(6023..6373)
DNA (351bp) protein (117aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1289_11
AR19, Pacearchaeaota, DPANN, Archaea

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6524..7156
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E9331
50S ribosomal protein L1
Tax=AR19
Meg22_1012_Bin_201_scaffold_1289_12
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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7153..8022
DNA (870bp) protein (290aa)
Ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY id=5102903 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal protein L10
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1012_Bin_201_scaffold_1289_13
unknown

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8015..8128
DNA (114bp) protein (38aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1289_14

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8130..8429
DNA (300bp) protein (100aa)
50S ribosomal protein L12 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HM78_PYRSN
Marine sediment metagenome DNA, contig: S01H1_S13923 {ECO:0000313|EMBL:GAG11466.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L12P
Meg22_1012_Bin_201_scaffold_1289_trna_1
unknown

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8600..8672
DNA (73bp)
transferRNA Thr
Meg22_1012_Bin_201_scaffold_1289_15
AR19, Pacearchaeaota, DPANN, Archaea

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8724..10682
DNA (1959bp) protein (653aa)
Rad3-related DNA helicase n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E2S1_METRM
xpd; putative DNA repair helicase XPD
Tax=AR19
Meg22_1012_Bin_201_scaffold_1289_16
unknown

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comp(10679..10792)
DNA (114bp) protein (38aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1289_trna_2
unknown

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comp(10696..10790)
DNA (95bp)
transferRNA Ser
Meg22_1012_Bin_201_scaffold_1289_17
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(10823..11092)
DNA (270bp) protein (90aa)
Tax=CG_Pacearch_01
Meg22_1012_Bin_201_scaffold_1289_18

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comp(11128..12609)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038087F2
Uncharacterized protein {ECO:0000313|EMBL:KHO53065.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
thymidine phosphorylase
Meg22_1012_Bin_201_scaffold_1289_19
AR13, Pacearchaeaota, DPANN, Archaea

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comp(12618..13685)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein
Tax=AR13
Meg22_1012_Bin_201_scaffold_1289_20

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13768..14493
DNA (726bp) protein (242aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55541.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Meg22_1012_Bin_201_scaffold_1289_21

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14674..15615
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48889.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
Meg22_1012_Bin_201_scaffold_1289_22

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15612..16400
DNA (789bp) protein (263aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS11686.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5041760 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L4
Meg22_1012_Bin_201_scaffold_1289_23
unknown

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16397..16555
DNA (159bp) protein (53aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1289_24

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16509..17198
DNA (690bp) protein (230aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFA4_9EURY
Marine sediment metagenome DNA, contig: S01H1_L04355 {ECO:0000313|EMBL:GAF84066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1012_Bin_201_scaffold_1289_25
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists


17191..17430
DNA (240bp) protein (80aa)
50S ribosomal protein L23P n=1 Tax=Thermococcus sp. CL1 RepID=I3ZSZ8_9EURY
50S ribosomal protein L23
Tax=AR13
Meg22_1012_Bin_201_scaffold_1289_26
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


17436..18134
DNA (699bp) protein (233aa)
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
Tax=AR19
Meg22_1012_Bin_201_scaffold_1289_27

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18174..18578
DNA (405bp) protein (135aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
Meg22_1012_Bin_201_scaffold_1289_28

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18624..19259
DNA (636bp) protein (212aa)
50S ribosomal protein L22P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL22_NANEQ id=5103257 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P
Displaying items 1-30 of 70 in total

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