ggKbase home page

Meg22_1012_Bin_201_scaffold_5465

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_201_scaffold_5465_1

Not on your lists

2..463
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3PWP3_MYCSJ
Uncharacterized protein {ECO:0000313|EMBL:KKL05220.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1012_Bin_201_scaffold_5465_2
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

465..947
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DF465
MarR family transcriptional regulator
Tax=AR13
Meg22_1012_Bin_201_scaffold_5465_3
unknown

Not on your lists

1042..1251
DNA (210bp) protein (70aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_4
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

1318..2127
DNA (810bp) protein (270aa)
PP-loop domain containing protein id=5046311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PP-loop ATPase, YdaO-type
Tax=AR13
Meg22_1012_Bin_201_scaffold_5465_5

Not on your lists

2603..3043
DNA (441bp) protein (147aa)
Transcriptional repressor NrdR n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKK87729.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transcriptional repressor NrdR
Meg22_1012_Bin_201_scaffold_5465_6
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3044..5083
DNA (2040bp) protein (680aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase class III catalytic subunit {ECO:0000313|EMBL:ACL69858.1}; EC=1.17.4.2 {ECO:0000313|EMBL:ACL69858.1};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
Ribonucleoside-triphosphate reductase class III catalytic subunit n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX39_HALOH
Meg22_1012_Bin_201_scaffold_5465_7
CG_CPR05_01, CG_CPR05, Bacteria

Not on your lists

5093..5248
DNA (156bp) protein (52aa)
NrdD; anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
ribonucleoside-triphosphate reductase n=1 Tax=Hippea alviniae RepID=UPI0003B5564A
Tax=CG_CPR05_01
Meg22_1012_Bin_201_scaffold_5465_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

5257..5955
DNA (699bp) protein (233aa)
Pyruvate-formate lyase-activating enzyme n=4 Tax=environmental samples RepID=Q64A12_9ARCH id=8594 bin=ACD15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
anaerobic ribonucleoside-triphosphate reductase activating protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1012_Bin_201_scaffold_5465_9
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5952..7178
DNA (1227bp) protein (409aa)
malic enzyme (EC:1.1.1.40 2.3.1.8)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M954_GEODF
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing {ECO:0000313|EMBL:ACM18612.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Meg22_1012_Bin_201_scaffold_5465_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7209..7532
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQR3_9CLOT
trx; thioredoxin
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_5465_11
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(7540..10890)
DNA (3351bp) protein (1117aa)
Tax=CG_Pacearch_04
Meg22_1012_Bin_201_scaffold_5465_12
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10898..12118)
DNA (1221bp) protein (407aa)
Uncharacterized protein id=1899340 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=GWF2_Elusimicrobia_62_30_curated
Meg22_1012_Bin_201_scaffold_5465_13
unknown

Not on your lists

comp(12210..12641)
DNA (432bp) protein (144aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_14
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12683..14152)
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV01_9EURY id=5103723 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_5465_15

Not on your lists

14228..14554
DNA (327bp) protein (109aa)
Marine sediment metagenome DNA, contig: S03H2_S06817 {ECO:0000313|EMBL:GAH50981.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1012_Bin_201_scaffold_5465_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14588..15802
DNA (1215bp) protein (405aa)
Glutamate--tRNA ligase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RI01_METVM
glutamyl-tRNA synthetase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_5465_17
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15865..16722)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E073_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH98690.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulfurireducens.;"
hypothetical protein
Meg22_1012_Bin_201_scaffold_5465_18
unknown

Not on your lists

comp(16917..17336)
DNA (420bp) protein (140aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_19
unknown

Not on your lists

comp(17306..17485)
DNA (180bp) protein (60aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_20
unknown

Not on your lists

comp(17548..17952)
DNA (405bp) protein (135aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_21
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(17943..18506)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003690F46
hypothetical protein
Tax=CG_Omnitr_02
Meg22_1012_Bin_201_scaffold_5465_22
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(18490..21528)
DNA (3039bp) protein (1013aa)
hsdR1; type I restriction-modification enzyme, subunit R (EC:3.1.21.3)
type I restriction endonuclease n=2 Tax=unclassified Aminicenantes RepID=UPI0003B75B2B
Tax=CG_Omnitr_02
Meg22_1012_Bin_201_scaffold_5465_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(21512..22162)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Guillardia theta CCMP2712 RepID=L1K3W1_GUITH
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_201_scaffold_5465_24
unknown

Not on your lists

comp(22278..22742)
DNA (465bp) protein (155aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_25
unknown

Not on your lists

comp(22739..23452)
DNA (714bp) protein (238aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_26
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(23449..24726)
DNA (1278bp) protein (426aa)
Type-1 restriction enzyme MjaXIP specificity protein n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=T1S1_METJA
Type-1 restriction enzyme MjaXIP specificity protein; Short=S.MjaXIP;; Type I restriction enzyme MjaXIP specificity protein; Short=S protein;; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
restriction modification system DNA specificity domain-containing protein
Meg22_1012_Bin_201_scaffold_5465_27
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24707..25303)
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG33312.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
Meg22_1012_Bin_201_scaffold_5465_28
unknown

Not on your lists

comp(25300..25983)
DNA (684bp) protein (228aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_29
unknown

Not on your lists

comp(25980..26852)
DNA (873bp) protein (291aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_5465_30
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(26854..27153)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP30771.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
Displaying items 1-30 of 102 in total

View Taxonomy