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Meg22_1012_Bin_201_scaffold_28348

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_201_scaffold_28348_1
AR13, Pacearchaeaota, DPANN, Archaea

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1..1449
DNA (1449bp) protein (483aa)
id=5049521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR13
Meg22_1012_Bin_201_scaffold_28348_2
unknown

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comp(1463..1690)
DNA (228bp) protein (76aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_28348_3

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comp(1677..2966)
DNA (1290bp) protein (430aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:452 RepID=R6XTC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHO46549.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Meg22_1012_Bin_201_scaffold_28348_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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3036..3707
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3H3_NITMS
conserved membrane protein of unknown function
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1012_Bin_201_scaffold_28348_5

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comp(3704..5422)
DNA (1719bp) protein (573aa)
Transporter, CPA2 family {ECO:0000313|EMBL:KHO53713.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
sodium/hydrogen exchanger id=5048682 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
sodium/hydrogen exchanger
Meg22_1012_Bin_201_scaffold_28348_6

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5526..5834
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HKT0_THES4
Marine sediment metagenome DNA, contig: S01H1_S20502 {ECO:0000313|EMBL:GAG16724.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps10p; 30S ribosomal protein S10P
Meg22_1012_Bin_201_scaffold_28348_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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5902..6192
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ71_METH6
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_28348_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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6252..6584
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003713E37
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_28348_9

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6698..7000
DNA (303bp) protein (101aa)
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:KHO54210.1}; Flags: Fragment;; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
RNA-binding protein RNP-2 id=5099591 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
RNP-1 like RNA-binding protein
Meg22_1012_Bin_201_scaffold_28348_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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7071..7772
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A8ED4
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_28348_11
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7777..8580)
DNA (804bp) protein (268aa)
Thymidylate synthase-like protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMW1_DESAA
thymidylate synthase-like protein
Thymidylate synthase-like protein {ECO:0000313|EMBL:ACL05831.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
Meg22_1012_Bin_201_scaffold_28348_12
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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8658..9293
DNA (636bp) protein (212aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000374C935
Thymidylate kinase {ECO:0000313|EMBL:KKQ17643.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
Meg22_1012_Bin_201_scaffold_28348_13
AR13, Pacearchaeaota, DPANN, Archaea

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9344..10396
DNA (1053bp) protein (351aa)
CMP/dCMP deaminase zinc-binding protein id=1767251 bin=GWE2_Bacteroidetes_42_42 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
deoxycytidylate deaminase
Tax=AR13
Meg22_1012_Bin_201_scaffold_28348_14
unknown

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comp(10402..10887)
DNA (486bp) protein (162aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_28348_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(10938..11228)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FBD3A
diphthamide biosynthesis protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_28348_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11262..11531
DNA (270bp) protein (90aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=5043579 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
methylated-DNA-protein-cysteine methyltransferase (EC:2.1.1.63)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_201_scaffold_28348_17
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

11659..13401
DNA (1743bp) protein (581aa)
Probable translation initiation factor IF-2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MW5_NANEQ
translation initiation factor IF-2
Tax=AR19
Meg22_1012_Bin_201_scaffold_28348_18
unknown

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13461..13649
DNA (189bp) protein (63aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_28348_19
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

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13715..15259
DNA (1545bp) protein (515aa)
Chromosome undetermined scaffold_33, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D0J6_PARTE
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
Displaying 19 items

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