ggKbase home page

Meg22_1012_Bin_283_scaffold_5121

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_283_scaffold_5121_1
unknown

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)

This feature has no annotations

Meg22_1012_Bin_283_scaffold_5121_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(417..1784)
DNA (1368bp) protein (456aa)
Tax=CG_Pacearch_05
Meg22_1012_Bin_283_scaffold_5121_3
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(1765..2385)
DNA (621bp) protein (207aa)
Tax=CG_Pacearch_05
Meg22_1012_Bin_283_scaffold_5121_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2421..3017)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C4421
alpha-ribazole phosphatase
Tax=CG_Pacearch_06
Meg22_1012_Bin_283_scaffold_5121_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

3331..4266
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288F093
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1012_Bin_283_scaffold_5121_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4487..5365)
DNA (879bp) protein (293aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S270_THEOJ
Tax=CG_Woesearch_02
Meg22_1012_Bin_283_scaffold_5121_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5700..6740)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003751392
Signal recognition particle GTPase
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_283_scaffold_5121_8

Not on your lists

6791..8029
DNA (1239bp) protein (413aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) {ECO:0000313|EMBL:EFK97897.1}; EC=5.4.2.1 {ECO:0000313|EMBL:EFK97897.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
Meg22_1012_Bin_283_scaffold_5121_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8107..8658
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_283_scaffold_5121_trna_6
unknown

Not on your lists

comp(8710..8818)
DNA (109bp)
transferRNA Thr
Meg22_1012_Bin_283_scaffold_5121_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(8855..9415)
DNA (561bp) protein (187aa)
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_283_scaffold_5121_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9417..9740)
DNA (324bp) protein (108aa)
50S ribosomal protein L44e id=5800650 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_283_scaffold_5121_trna_5
unknown

Not on your lists

comp(9823..9895)
DNA (73bp)
transferRNA Val
Meg22_1012_Bin_283_scaffold_5121_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

9970..11817
DNA (1848bp) protein (616aa)
Tax=CG_Pacearch_05
Meg22_1012_Bin_283_scaffold_5121_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11819..16639
DNA (4821bp) protein (1607aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_283_scaffold_5121_14
unknown

Not on your lists

comp(16698..17390)
DNA (693bp) protein (231aa)

This feature has no annotations

Meg22_1012_Bin_283_scaffold_5121_trna_4
unknown

Not on your lists

comp(17565..17648)
DNA (84bp)
transferRNA Leu
Meg22_1012_Bin_283_scaffold_5121_15
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(17739..18665)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AB4A9
Transcription initiation factor IIB
Tax=CG_Pacearch_02
Meg22_1012_Bin_283_scaffold_5121_16

Not on your lists

comp(18805..19182)
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small subunit ribosomal protein S8e {ECO:0000313|EMBL:KHO49944.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
30S ribosomal protein S8e
Meg22_1012_Bin_283_scaffold_5121_17

Not on your lists

19636..19893
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367D4C7
Marine sediment metagenome DNA, contig: S01H1_L02178 {ECO:0000313|EMBL:GAF71492.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Like-Sm ribonucleoprotein core
Meg22_1012_Bin_283_scaffold_5121_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20003..20899)
DNA (897bp) protein (299aa)
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_283_scaffold_5121_trna_1
unknown

Not on your lists

20999..21111
DNA (113bp)
transferRNA Arg
Meg22_1012_Bin_283_scaffold_5121_19
unknown

Not on your lists

21211..21528
DNA (318bp) protein (106aa)

This feature has no annotations

Meg22_1012_Bin_283_scaffold_5121_trna_2
unknown

Not on your lists

21555..21674
DNA (120bp)
transferRNA Cys
Meg22_1012_Bin_283_scaffold_5121_20
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


21876..23621
DNA (1746bp) protein (582aa)
Putative tRNA synthetase class II core domain (G, H, P, S and T) n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW141O9 RepID=B3T652_9ARCH id=5103040 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR19
Meg22_1012_Bin_283_scaffold_5121_21

Not on your lists

23711..23899
DNA (189bp) protein (63aa)
Marine sediment metagenome DNA, contig: S12H4_S24778 {ECO:0000313|EMBL:GAJ18434.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1012_Bin_283_scaffold_5121_trna_3
unknown

Not on your lists

23971..24041
DNA (71bp)
transferRNA Ala
Displaying 27 items

View Taxonomy