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Meg22_1012_Bin_87_scaffold_19468

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_87_scaffold_19468_1
GWA2_OP3X_41_15_curated, OP3X, Bacteria

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comp(1..855)
DNA (855bp) protein (285aa)
PDK repeat-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CG07_9GAMM
carboxypeptidase T
Tax=GWA2_OP3X_41_15_curated
Meg22_1012_Bin_87_scaffold_19468_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(953..1753)
DNA (801bp) protein (267aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Similar to 8-oxoguanine glycosylase (Hogg1) id=4810420 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RBG_16_Euryarchaeota_41_19_curated
Meg22_1012_Bin_87_scaffold_19468_3
unknown

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comp(1750..2184)
DNA (435bp) protein (145aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_19468_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2214..2711)
DNA (498bp) protein (166aa)
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_19468_5

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comp(2858..3250)
DNA (393bp) protein (131aa)
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61087.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Meg22_1012_Bin_87_scaffold_19468_6
CG_Woesearch_02, Woesearchaeota, Archaea

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3372..3776
DNA (405bp) protein (135aa)
Automatic annotation id=4571209 bin=GWF2_Methylomirabilis_70_14 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UPF0047 domain containing protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_19468_7
CG_Woesearch_02, Woesearchaeota, Archaea

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3773..4225
DNA (453bp) protein (151aa)
Putative transcription factor, MBF1 like protein id=5800236 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_19468_8
unknown

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4222..4776
DNA (555bp) protein (185aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_19468_9

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comp(4779..5426)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG11109.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
id=5044968 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Meg22_1012_Bin_87_scaffold_19468_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(5420..6631)
DNA (1212bp) protein (404aa)
glycosyltransferase id=5040558 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Glycosyltransferase involved in cell wall biogenesis
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1012_Bin_87_scaffold_19468_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6633..8063)
DNA (1431bp) protein (477aa)
id=5050180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_19468_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8054..9574)
DNA (1521bp) protein (507aa)
Uncharacterized protein id=5050179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_19468_13

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9647..10351
DNA (705bp) protein (235aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA repair and recombination protein radB
Meg22_1012_Bin_87_scaffold_19468_14
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(10372..10974)
DNA (603bp) protein (201aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR78533.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
30S ribosomal protein S2
Displaying 14 items

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