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Meg22_1012_Bin_87_scaffold_20087

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_87_scaffold_20087_1
RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated, Roizmannbacteria, Microgenomates, Bacteria

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comp(3..1067)
DNA (1065bp) protein (355aa)
Tax=RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated
Meg22_1012_Bin_87_scaffold_20087_trna_1
unknown

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1179..1367
DNA (189bp)
transferRNA Tyr
Meg22_1012_Bin_87_scaffold_20087_2
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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1435..1698
DNA (264bp) protein (88aa)
Predicted enzyme of the cupin superfamily id=4677586 bin=GWA2_Elusimicrobia_56_46 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
Meg22_1012_Bin_87_scaffold_20087_3

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comp(1699..2769)
DNA (1071bp) protein (357aa)
Marine sediment metagenome DNA, contig: S01H1_L05969 {ECO:0000313|EMBL:GAF69391.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MscS Mechanosensitive ion channel id=5093976 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
small-conductance mechanosensitive channel
Meg22_1012_Bin_87_scaffold_20087_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2901..3206
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790562
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1012_Bin_87_scaffold_20087_5

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3338..4588
DNA (1251bp) protein (417aa)
Probable ATP-dependent RNA helicase {ECO:0000313|EMBL:CBH36977.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH36977.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Probable ATP-dependent RNA helicase n=1 Tax=uncultured archaeon RepID=D1JEL9_9ARCH
ATP-dependent RNA helicase
Meg22_1012_Bin_87_scaffold_20087_trna_2
unknown

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4710..4780
DNA (71bp)
transferRNA Pseudo
Meg22_1012_Bin_87_scaffold_20087_6
AR11, Woesearchaeaota, DPANN, Archaea

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4932..5162
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRZ4_9EURY
DNA-directed RNA polymerase subunit H
Tax=AR11
Meg22_1012_Bin_87_scaffold_20087_7

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5164..6666
DNA (1503bp) protein (501aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:KHO46962.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO46962.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA-directed RNA polymerase
Meg22_1012_Bin_87_scaffold_20087_8
CG_Woesearch_02, Woesearchaeota, Archaea

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6710..8512
DNA (1803bp) protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_20087_9

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8514..11249
DNA (2736bp) protein (912aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Meg22_1012_Bin_87_scaffold_20087_10
AR15, Woesearchaeaota, DPANN, Archaea

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11300..12424
DNA (1125bp) protein (375aa)
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
Tax=AR15
Meg22_1012_Bin_87_scaffold_20087_11
AR15, Woesearchaeaota, DPANN, Archaea

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12577..12843
DNA (267bp) protein (89aa)
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
Tax=AR15
Meg22_1012_Bin_87_scaffold_20087_12
CG_Woesearch_02, Woesearchaeota, Archaea

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12844..13263
DNA (420bp) protein (140aa)
Putative transcription termination factor NusA id=5799590 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_20087_13
CG_Woesearch_02, Woesearchaeota, Archaea

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13316..13753
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_20087_14
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


13750..14343
DNA (594bp) protein (198aa)
30S ribosomal protein S7 id=5799588 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S7
Tax=CG_Woesearch_03
Meg22_1012_Bin_87_scaffold_20087_15
unknown

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14642..14797
DNA (156bp) protein (52aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_20087_16
unknown

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14800..15219
DNA (420bp) protein (140aa)

This feature has no annotations

Displaying 18 items

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