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Meg22_1012_Bin_87_scaffold_22139

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_87_scaffold_22139_trna_1
unknown

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20..90
DNA (71bp)
transferRNA Gly
Meg22_1012_Bin_87_scaffold_22139_1
unknown

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170..547
DNA (378bp) protein (126aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_22139_2
unknown

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549..1175
DNA (627bp) protein (209aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_22139_3

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comp(1142..1438)
DNA (297bp) protein (99aa)
Marine sediment metagenome DNA, contig: S01H1_S02997 {ECO:0000313|EMBL:GAF87336.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Meg22_1012_Bin_87_scaffold_22139_4
AR15, Woesearchaeaota, DPANN, Archaea

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1522..2952
DNA (1431bp) protein (477aa)
tRNA-splicing ligase RtcB id=5800748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA-splicing ligase RtcB
Tax=AR15
Meg22_1012_Bin_87_scaffold_22139_5
AR19, Pacearchaeaota, DPANN, Archaea

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2949..3362
DNA (414bp) protein (138aa)
Protein archease n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWV1_THEPD
hypothetical protein
Tax=AR19
Meg22_1012_Bin_87_scaffold_22139_6
unknown

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comp(3366..3563)
DNA (198bp) protein (66aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_22139_7

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comp(3617..7105)
DNA (3489bp) protein (1163aa)
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
Meg22_1012_Bin_87_scaffold_22139_8
unknown

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comp(7105..7275)
DNA (171bp) protein (57aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_22139_9
unknown

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7391..7738
DNA (348bp) protein (116aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_22139_10
unknown

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comp(7745..8092)
DNA (348bp) protein (116aa)

This feature has no annotations

Meg22_1012_Bin_87_scaffold_22139_11
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

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comp(8222..8479)
DNA (258bp) protein (86aa)
cold-shock protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003672520
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KKQ84172.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
cold-shock DNA-binding domain-containing protein
Meg22_1012_Bin_87_scaffold_22139_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8558..9208)
DNA (651bp) protein (217aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ribonuclease
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_22139_13

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9289..9969
DNA (681bp) protein (227aa)
Ribosomal protein S3Ae (RP-S3Ae, RPS3A) {ECO:0000313|EMBL:AIF00811.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
Meg22_1012_Bin_87_scaffold_22139_14
CG_Woesearch_02, Woesearchaeota, Archaea

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10002..10169
DNA (168bp) protein (56aa)
BUD32 protein kinase n=1 Tax=Vittaforma corneae (strain ATCC 50505) RepID=L2GQ60_VITCO
Tax=CG_Woesearch_02
Displaying 15 items

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