ggKbase home page

Meg22_1012_Bin_87_scaffold_46625

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_87_scaffold_46625_1

Not on your lists

comp(2..784)
DNA (783bp) protein (261aa)
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61440.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
Meg22_1012_Bin_87_scaffold_46625_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(830..1405)
DNA (576bp) protein (192aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_46625_3
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

1488..2378
DNA (891bp) protein (297aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
Tax=CG_Pacearch_04
Meg22_1012_Bin_87_scaffold_46625_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

2384..2773
DNA (390bp) protein (130aa)
Predicted archaeal holliday junction resolvase id=5800106 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Holliday junction-type resolvase
Tax=CG_Woesearch_01
Meg22_1012_Bin_87_scaffold_46625_5

Not on your lists

2806..3315
DNA (510bp) protein (170aa)
Marine sediment metagenome DNA, contig: S01H1_L06225 {ECO:0000313|EMBL:GAF73174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
Meg22_1012_Bin_87_scaffold_46625_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3370..4281)
DNA (912bp) protein (304aa)
translation initiation factor IF-2; K03680 translation initiation factor eIF-2B subunit delta id=5097632 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
translation initiation factor IF-2B subunit delta
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_46625_7
unknown

Not on your lists

comp(4354..4665)
DNA (312bp) protein (104aa)
RNA polymerase sigma factor n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NI61_DESSD
RNA polymerase sigma factor, sigma-70 family
Meg22_1012_Bin_87_scaffold_46625_8

Not on your lists

comp(4709..4987)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50513.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Meg22_1012_Bin_87_scaffold_46625_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(5065..5547)
DNA (483bp) protein (161aa)
hypothetical protein id=5041817 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_01
Meg22_1012_Bin_87_scaffold_46625_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

5862..7070
DNA (1209bp) protein (403aa)
cell division control protein 6; K10725 archaeal cell division control protein 6 id=5046339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ORC1-type DNA replication protein
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1012_Bin_87_scaffold_46625_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7072..8523
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5DB
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_87_scaffold_46625_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8585..11077
DNA (2493bp) protein (831aa)
DNA polymerase II large subunit id=5800100 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase II large subunit
Tax=CG_Woesearch_02
Displaying 12 items

View Taxonomy