ggKbase home page
Advanced Search
Search Help

Meg22_1214_Bin_103

DPANN_genomes_binning_unknown_42_0
In projects: DPANN_genomes_binning  |  DPANN

Consensus taxonomy:

Metagenomic Context

Parent: DPANN_genomes_binning_UNK

Properties

Avg. coverage: 0.01 Longest contig: 49.98 Kbp Bin length: 879.63 Kbp GC content: 41.59 %
Contigs count: 79 Features count: 1000 rRNAs count: 0 tRNAs count: 6

Genome completeness

near complete RP 29 / 55 MC: 2 BSCG 19 / 51 ASCG 33 / 38 MC: 1
Displaying items 1-50 of 79 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Meg22_1214_Bin_103_scaffold_2647
Domain: Archaea (58.82%)
51 49982 bp 43.45 0.00 92.67
Meg22_1214_Bin_103_scaffold_3183 44 32915 bp 41.21 0.00 89.00
Meg22_1214_Bin_103_scaffold_4635
Domain: Archaea (60.47%)
43 41322 bp 43.50 0.00 71.11
Meg22_1214_Bin_103_scaffold_5324 37 31932 bp 43.41 0.00 90.03
Meg22_1214_Bin_103_scaffold_5928 35 24148 bp 40.10 0.01 80.74
Meg22_1214_Bin_103_scaffold_9525 29 18673 bp 40.07 0.01 90.15
Meg22_1214_Bin_103_scaffold_3149
Domain: Archaea (57.14%)
28 33098 bp 41.08 0.00 95.72
Meg22_1214_Bin_103_scaffold_8913
Domain: Archaea (60.71%)
28 19375 bp 41.67 0.01 88.15
Meg22_1214_Bin_103_scaffold_6242
Domain: Archaea (58.33%)
24 23470 bp 39.74 0.01 90.63
Meg22_1214_Bin_103_scaffold_23964 24 16814 bp 37.21 0.01 81.18
Meg22_1214_Bin_103_scaffold_6068
Domain: Archaea (63.64%)
22 23840 bp 42.44 0.01 91.54
Meg22_1214_Bin_103_scaffold_16728 22 13278 bp 42.34 0.01 97.22
Meg22_1214_Bin_103_scaffold_14718
Domain: Archaea (76.19%)
21 24001 bp 44.44 0.01 95.76
Meg22_1214_Bin_103_scaffold_11354
Domain: Archaea (55%)
20 16877 bp 43.00 0.01 82.94
Meg22_1214_Bin_103_scaffold_40676
Domain: Archaea (85%)
20 9508 bp 41.58 0.02 90.27
Meg22_1214_Bin_103_scaffold_7901 19 22118 bp 41.22 0.01 90.91
Meg22_1214_Bin_103_scaffold_15163
Domain: Archaea (50%)
18 14166 bp 44.59 0.01 83.25
Meg22_1214_Bin_103_scaffold_12297
Domain: Archaea (70.59%)
17 16102 bp 41.95 0.01 85.33
Meg22_1214_Bin_103_scaffold_4864
Domain: Archaea (56.25%)
16 26742 bp 41.15 0.01 95.59
Meg22_1214_Bin_103_scaffold_11293
Domain: Archaea (62.5%)
16 16918 bp 44.63 0.01 95.33
Meg22_1214_Bin_103_scaffold_22186
Domain: Archaea (56.25%)
16 11117 bp 41.90 0.01 91.48
Meg22_1214_Bin_103_scaffold_24428 16 10441 bp 44.06 0.01 93.58
Meg22_1214_Bin_103_scaffold_24217 15 14978 bp 43.03 0.01 88.91
Meg22_1214_Bin_103_scaffold_13216
Domain: Archaea (50%)
14 15432 bp 38.10 0.01 92.15
Meg22_1214_Bin_103_scaffold_17363
Domain: Bacteria (64.29%)
14 12956 bp 34.69 0.01 96.84
Meg22_1214_Bin_103_scaffold_29786
Domain: Archaea (50%)
14 9148 bp 44.14 0.02 94.18
Meg22_1214_Bin_103_scaffold_14716 13 14416 bp 43.26 0.01 88.63
Meg22_1214_Bin_103_scaffold_20036 13 11859 bp 35.63 0.01 97.37
Meg22_1214_Bin_103_scaffold_21105
Domain: Archaea (53.85%)
13 11470 bp 42.19 0.01 94.18
Meg22_1214_Bin_103_scaffold_28769 13 10656 bp 40.93 0.01 95.02
Meg22_1214_Bin_103_scaffold_33671 13 8407 bp 42.46 0.02 84.86
Meg22_1214_Bin_103_scaffold_58359 13 13882 bp 43.84 0.01 94.72
Meg22_1214_Bin_103_scaffold_38717
Domain: Archaea (58.33%)
12 7619 bp 39.44 0.02 86.63
Meg22_1214_Bin_103_scaffold_35810 11 8054 bp 41.49 0.02 84.26
Meg22_1214_Bin_103_scaffold_44483
Domain: Archaea (63.64%)
11 6942 bp 38.62 0.02 78.39
Meg22_1214_Bin_103_scaffold_20012
Domain: Archaea (70%)
10 11867 bp 40.29 0.01 94.80
Meg22_1214_Bin_103_scaffold_25514
Domain: Archaea (70%)
10 10149 bp 40.06 0.01 90.19
Meg22_1214_Bin_103_scaffold_27757 10 9590 bp 41.67 0.02 93.19
Meg22_1214_Bin_103_scaffold_25083 9 10262 bp 37.68 0.01 98.05
Meg22_1214_Bin_103_scaffold_35442 9 8599 bp 42.61 0.02 96.26
Meg22_1214_Bin_103_scaffold_36791 9 7895 bp 42.12 0.02 92.34
Meg22_1214_Bin_103_scaffold_63405
Domain: Archaea (66.67%)
9 5976 bp 43.09 0.03 83.73
Meg22_1214_Bin_103_scaffold_277867 8 3075 bp 36.03 0.05 67.41
Meg22_1214_Bin_103_scaffold_28896
Domain: Archaea (62.5%)
8 9335 bp 43.62 0.02 88.99
Meg22_1214_Bin_103_scaffold_52236 8 6186 bp 39.90 0.02 86.37
Meg22_1214_Bin_103_scaffold_65529 8 5251 bp 38.34 0.03 89.64
Meg22_1214_Bin_103_scaffold_66489
Domain: Archaea (62.5%)
8 5190 bp 44.18 0.03 88.32
Meg22_1214_Bin_103_scaffold_71811 8 4909 bp 38.01 0.03 95.27
Meg22_1214_Bin_103_scaffold_75211
Domain: Bacteria (50%)
8 4742 bp 39.60 0.03 95.66
Meg22_1214_Bin_103_scaffold_180665 7 2441 bp 38.26 0.06 100.04
Displaying items 1-50 of 79 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.