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Meg22_1214_Bin_103_scaffold_2647

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_103_scaffold_2647_1
unknown

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comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_2
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(435..1103)
DNA (669bp) protein (223aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
Endonuclease III n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TC36_METSL
Meg22_1214_Bin_103_scaffold_2647_3
GWE2_OD1_38_254, Falkowbacteria, Parcubacteria, Bacteria

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1146..1586
DNA (441bp) protein (147aa)
Maf-like protein LDC_1939 id=1987403 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ64948.1}; TaxID=1618639 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWE2_38_254.;"
Meg22_1214_Bin_103_scaffold_2647_4
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

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1638..2147
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000374AB5E
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:JAC66323.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetraselmis sp. GSL018.;"
dimethyladenosine transferase
Meg22_1214_Bin_103_scaffold_2647_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(2163..2918)
DNA (756bp) protein (252aa)
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen id=5046287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
Tax=CG_Aenigma_01
Meg22_1214_Bin_103_scaffold_2647_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(2964..3368)
DNA (405bp) protein (135aa)
OB-fold nucleic acid binding domain family protein id=4352932 bin=PER_GWC2_41_7 species=Candidatus Nanosalinarum sp. J07AB56 genus=Candidatus Nanosalinarum taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
replication factor A complex, RPA14 subunit
Tax=CG_Aenigma_01
Meg22_1214_Bin_103_scaffold_2647_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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3436..4728
DNA (1293bp) protein (431aa)
Aspartyl-tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6A7_9EURY
aspC; aspartyl-tRNA ligase
Aspartyl-tRNA ligase {ECO:0000313|EMBL:AGN26527.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
Meg22_1214_Bin_103_scaffold_2647_8
unknown

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4783..5175
DNA (393bp) protein (131aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(5194..11646)
DNA (6453bp) protein (2151aa)
APHP domain-containing protein id=5800628 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_103_scaffold_2647_10
unknown

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11706..11933
DNA (228bp) protein (76aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_11
unknown

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11949..12323
DNA (375bp) protein (125aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_12
unknown

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12371..12847
DNA (477bp) protein (159aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_13
unknown

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12888..14015
DNA (1128bp) protein (376aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_14
unknown

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14012..14536
DNA (525bp) protein (175aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_15
unknown

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14560..15093
DNA (534bp) protein (178aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_16
unknown

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15170..17020
DNA (1851bp) protein (617aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_17
unknown

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17032..21426
DNA (4395bp) protein (1465aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_18
unknown

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21456..23006
DNA (1551bp) protein (517aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_19
unknown

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comp(23147..24922)
DNA (1776bp) protein (592aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_20
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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24990..25667
DNA (678bp) protein (226aa)
Helicase-associated endonuclease for fork-structured DNA n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JJ98_THEKO
ERCC4-like helicase
ERCC4-like helicase {ECO:0000313|EMBL:AHL22546.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
Meg22_1214_Bin_103_scaffold_2647_21

Not on your lists

comp(25668..27356)
DNA (1689bp) protein (563aa)
pyrG; CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=5048443 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
pyrG; CTP synthase (EC:6.3.4.2)
Meg22_1214_Bin_103_scaffold_2647_22
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(27575..28012)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YQY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51375.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
alpha-L-glutamate ligase
Meg22_1214_Bin_103_scaffold_2647_23
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

28055..29602
DNA (1548bp) protein (516aa)
ATP-dependent RNA helicase, EIF-4A family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D67_METBF
ATP-dependent RNA helicase, EIF-4A family
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_103_scaffold_2647_24
unknown

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29759..30043
DNA (285bp) protein (95aa)

This feature has no annotations

Meg22_1214_Bin_103_scaffold_2647_25
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

30012..31304
DNA (1293bp) protein (431aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=4935172 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=CG_Aenigma_01
Meg22_1214_Bin_103_scaffold_2647_26
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31398..32597
DNA (1200bp) protein (400aa)
Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01402}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01402};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01402};; Short=aPGAM {ECO:0000256|HAMAP-Rule:MF_01402};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01402};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1J1_9BACT
Meg22_1214_Bin_103_scaffold_2647_27
AR5, Aenigmarchaeota, DPANN, Archaea

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32882..33586
DNA (705bp) protein (235aa)
Proteasome endopeptidase complex (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=18248365 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
proteasome subunit alpha (EC:3.4.25.1)
Tax=AR5
Meg22_1214_Bin_103_scaffold_2647_28

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33722..34426
DNA (705bp) protein (235aa)
rRNA metabolism protein, SBDS family n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TE95_9EURY
Marine sediment metagenome DNA, contig: S12H4_C01193 {ECO:0000313|EMBL:GAI72441.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1214_Bin_103_scaffold_2647_29
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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34516..35307
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003632410
putative exosome complex RNA-binding protein 1
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_103_scaffold_2647_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

35246..35977
DNA (732bp) protein (244aa)
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5044446 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
exosome complex exonuclease Rrp41
Tax=AR5
Displaying items 1-30 of 51 in total

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