ggKbase home page

Meg22_1214_Bin_123_scaffold_32661

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_123_scaffold_32661_1
unknown

Not on your lists

1..645
DNA (645bp) protein (215aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_32661_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

651..1496
DNA (846bp) protein (282aa)
Conserved TM helix repeat-containing protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XU35_PSEMY
TM helix repeat-containing protein
Conserved TM helix repeat-containing protein {ECO:0000313|EMBL:ABP84851.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
Meg22_1214_Bin_123_scaffold_32661_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1535..2611
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K2H5_TREMA
peptidase M29 aminopeptidase II
Tax=CG_Woesearch_02
Meg22_1214_Bin_123_scaffold_32661_4
unknown

Not on your lists

2612..3334
DNA (723bp) protein (241aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_32661_5
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3562..5145)
DNA (1584bp) protein (528aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365A573
lysyl-tRNA synthetase
Meg22_1214_Bin_123_scaffold_32661_6
unknown

Not on your lists

5247..5666
DNA (420bp) protein (140aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_32661_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(5632..6333)
DNA (702bp) protein (234aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B id=18314534 bin=Nanosalina tax=Nanosalina
hypothetical protein
Tax=CG_Aenigma_01
Meg22_1214_Bin_123_scaffold_32661_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(6344..7099)
DNA (756bp) protein (252aa)
condensin subunit ScpA; K05896 segregation and condensation protein A id=18247995 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Chromosome segregation and condensation protein ScpA
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_123_scaffold_32661_9
unknown

Not on your lists

comp(7145..7450)
DNA (306bp) protein (102aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_32661_10

Not on your lists

7517..7885
DNA (369bp) protein (123aa)
Marine sediment metagenome DNA, contig: S01H4_S22331 {ECO:0000313|EMBL:GAH07788.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_123_scaffold_32661_11

Not on your lists

7929..8444
DNA (516bp) protein (172aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=5040651 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
Meg22_1214_Bin_123_scaffold_32661_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8434..8583)
DNA (150bp) protein (50aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Endonuclease III n=1 Tax=uncultured crenarchaeote RepID=Q702G0_9CREN
Displaying 12 items

View Taxonomy