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Meg22_1214_Bin_123_scaffold_42384

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_123_scaffold_42384_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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2..1132
DNA (1131bp) protein (377aa)
SMC domain protein n=1 Tax=mine drainage metagenome RepID=T0ZS85_9ZZZZ
exonuclease SbcC
Tax=CG_Aenigma_01
Meg22_1214_Bin_123_scaffold_42384_2
unknown

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1184..1471
DNA (288bp) protein (96aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_42384_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1483..2082)
DNA (600bp) protein (200aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=18313111 bin=Haloredivivus tax=Haloredivivus
30S ribosomal protein S7
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_123_scaffold_42384_4

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comp(2084..2518)
DNA (435bp) protein (145aa)
30S ribosomal protein S12 n=4 Tax=Euryarchaeota RepID=RS12_PYRAB
Marine sediment metagenome DNA, contig: S01H1_L02840 {ECO:0000313|EMBL:GAF81713.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps12P; 30S ribosomal protein S12
Meg22_1214_Bin_123_scaffold_42384_5

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comp(2603..2800)
DNA (198bp) protein (66aa)
Marine sediment metagenome DNA, contig: S01H1_L02840 {ECO:0000313|EMBL:GAF81711.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_123_scaffold_42384_6
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2814..3593)
DNA (780bp) protein (260aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
DNA-directed RNA polymerase subunit D id=4922286 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Meg22_1214_Bin_123_scaffold_42384_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(3590..3994)
DNA (405bp) protein (135aa)
NusA family KH domain protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QI12_9EURY
nusA; transcription elongation factor NusA-like protein
Tax=CG_Aenigma_01
Meg22_1214_Bin_123_scaffold_42384_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(4027..4362)
DNA (336bp) protein (112aa)
50S ribosomal protein L30e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR6_METFV
50S ribosomal protein L30e
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_123_scaffold_42384_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(4373..4759)
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS8_METKA
rps8p; 30S ribosomal protein S8P
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_42384_10

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comp(4768..4989)
DNA (222bp) protein (74aa)
SSU ribosomal protein S14P n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QB90_9EURY id=5103266 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SSU ribosomal protein S14P
SSU ribosomal protein S14P {ECO:0000313|EMBL:AJF62547.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_123_scaffold_42384_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(4989..5501)
DNA (513bp) protein (171aa)
50S ribosomal protein L5 n=2 Tax=Pyrococcus furiosus RepID=RL5_PYRFU
rpl5p; 50S ribosomal protein L5
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_123_scaffold_42384_12
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(5498..6265)
DNA (768bp) protein (256aa)
30S ribosomal protein S4e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD1_METFV
30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Meg22_1214_Bin_123_scaffold_42384_13

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comp(6265..6810)
DNA (546bp) protein (182aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P id=4909395 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L26e (L24p)
Meg22_1214_Bin_123_scaffold_42384_14
unknown

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comp(6807..7022)
DNA (216bp) protein (72aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_42384_15
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(7024..7419)
DNA (396bp) protein (132aa)
50S ribosomal protein L14 n=1 Tax=uncultured archaeon RepID=D1JEB6_9ARCH
50S ribosomal protein L14b/L23e
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_42384_16

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comp(7416..7754)
DNA (339bp) protein (113aa)
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RET7_METVM
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12120.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
Meg22_1214_Bin_123_scaffold_42384_17
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(7900..8181)
DNA (282bp) protein (94aa)
Ribonuclease P protein component 1 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6E1_METSF
Ribonuclease P
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_42384_18
unknown

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comp(8178..8243)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 18 items

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