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Meg22_1214_Bin_123_scaffold_48971

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_123_scaffold_48971_1
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..255)
DNA (255bp) protein (85aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC6_METFV
translation initiation factor 1 (eif-1/sui1)
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Meg22_1214_Bin_123_scaffold_48971_2

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comp(248..466)
DNA (219bp) protein (73aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5044368 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L29P
Meg22_1214_Bin_123_scaffold_48971_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(477..1193)
DNA (717bp) protein (239aa)
30S ribosomal protein S3 n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9REU1_METVM
rps3p; 30S ribosomal protein S3
Tax=CG_Aenigma_01
Meg22_1214_Bin_123_scaffold_48971_4

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comp(1196..1582)
DNA (387bp) protein (129aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=18248298 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L22
Meg22_1214_Bin_123_scaffold_48971_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(1582..1962)
DNA (381bp) protein (127aa)
ribosomal protein S19
30S ribosomal protein S19 id=4909360 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=CG_Aenigma_01
Meg22_1214_Bin_123_scaffold_48971_6
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(1966..2634)
DNA (669bp) protein (223aa)
50S ribosomal protein L2P id=4909359 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L2
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_48971_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(2671..3105)
DNA (435bp) protein (145aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=18311805 bin=Haloredivivus tax=Haloredivivus
RplW; ribosomal protein L23
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_123_scaffold_48971_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(3214..4014)
DNA (801bp) protein (267aa)
50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=18248294 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl4p; 50S ribosomal protein L4P
Tax=CG_Aenigma_01
Meg22_1214_Bin_123_scaffold_48971_9
unknown

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comp(4080..4250)
DNA (171bp) protein (57aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_48971_10
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4759..5313
DNA (555bp) protein (185aa)
30S ribosomal protein S13 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE9_METFV
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Meg22_1214_Bin_123_scaffold_48971_11
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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5318..5785
DNA (468bp) protein (156aa)
30S ribosomal protein S4 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6X7_METSF
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
Meg22_1214_Bin_123_scaffold_48971_12

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5795..6202
DNA (408bp) protein (136aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5042090 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
30S ribosomal protein S11
Meg22_1214_Bin_123_scaffold_48971_13

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6202..6480
DNA (279bp) protein (93aa)
50S ribosomal protein L3 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B968_9EURY
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L3P
Displaying 13 items

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