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Meg22_1214_Bin_175_scaffold_4657

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_175_scaffold_4657_1
unknown

Not on your lists

92..562
DNA (471bp) protein (157aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_4657_2

Not on your lists

750..7775
DNA (7026bp) protein (2342aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EXG4_AMPQE
Virginiamycin B lyase protein {ECO:0000313|EMBL:KFM21810.1}; Flags: Fragment;; TaxID=1502289 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-B03.;"
hypothetical protein
Meg22_1214_Bin_175_scaffold_4657_3
unknown

Not on your lists

comp(7828..8250)
DNA (423bp) protein (141aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_4657_4
unknown

Not on your lists

comp(8268..8633)
DNA (366bp) protein (122aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_4657_trna_2
unknown

Not on your lists

comp(8706..8789)
DNA (84bp)
transferRNA Ser
Meg22_1214_Bin_175_scaffold_4657_5
unknown

Not on your lists

comp(8885..9034)
DNA (150bp) protein (50aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_4657_6
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(9091..10872)
DNA (1782bp) protein (594aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV
translation initiation factor eaif-5b
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Meg22_1214_Bin_175_scaffold_4657_7

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comp(10944..11408)
DNA (465bp) protein (155aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045788 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
nucleoside-diphosphate kinase (EC:2.7.4.6)
Meg22_1214_Bin_175_scaffold_4657_8
unknown

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comp(11468..11695)
DNA (228bp) protein (76aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_4657_9
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(11747..11926)
DNA (180bp) protein (60aa)
50S ribosomal protein L24e n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNH4_9EURY
LSU ribosomal protein L24E
50S ribosomal protein L24e {ECO:0000256|HAMAP-Rule:MF_00773}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
Meg22_1214_Bin_175_scaffold_4657_10

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comp(11923..12201)
DNA (279bp) protein (93aa)
30S ribosomal protein S28e n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RS28_AERPE id=5103742 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_175_scaffold_4657_11
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(12213..12533)
DNA (321bp) protein (107aa)
50S ribosomal protein L7Ae n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5N4_KORCO
rpl7ae; 50S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
Meg22_1214_Bin_175_scaffold_4657_12

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comp(12676..13320)
DNA (645bp) protein (215aa)
Marine sediment metagenome DNA, contig: S06H3_S00072 {ECO:0000313|EMBL:GAI20939.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Metallophosphoesterase id=5799698 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
Meg22_1214_Bin_175_scaffold_4657_13
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(13341..15041)
DNA (1701bp) protein (567aa)
Glutamate--tRNA ligase {ECO:0000256|SAAS:SAAS00088701}; EC=6.1.1.17 {ECO:0000256|SAAS:SAAS00088701};; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
Glutamyl-tRNA synthetase, archaeal and eukaryotic family n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U9G0_9EURY
Glutamate-tRNA ligase
Meg22_1214_Bin_175_scaffold_4657_14

Not on your lists

comp(15106..16440)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
RNA-metabolising metallo-beta-lactamase
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:AJF62255.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_175_scaffold_4657_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(16568..17668)
DNA (1101bp) protein (367aa)
ABC-type transport system involved in Fe-S cluster assembly, permease component n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 PF7_9EURY">RepID=N6VPF7_9EURY
ABC-type transport system involved in Fe-S cluster assembly, permease component {ECO:0000313|EMBL:ENO12120.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
Iron-sulfur cluster assembly protein SufB
Meg22_1214_Bin_175_scaffold_4657_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17644..18366)
DNA (723bp) protein (241aa)
Iron-regulated ABC transporter ATPase subunit SufC n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4B3_GEOUR
ABC transporter-like protein
Iron-regulated ABC transporter ATPase subunit SufC {ECO:0000313|EMBL:ABQ26631.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Meg22_1214_Bin_175_scaffold_4657_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18347..18700)
DNA (354bp) protein (118aa)
hypothetical protein; K09005 hypothetical protein id=5043757 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Meg22_1214_Bin_175_scaffold_4657_18
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(18747..19565)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FCCF0
hypothetical protein
Tax=CG_Pacearch_04
Meg22_1214_Bin_175_scaffold_4657_19

Not on your lists


comp(19676..20263)
DNA (588bp) protein (196aa)
30S ribosomal protein S2 {ECO:0000256|SAAS:SAAS00084186}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S2 id=5799985 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S2
Meg22_1214_Bin_175_scaffold_4657_20
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20274..21509)
DNA (1236bp) protein (412aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Enolase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF8_METFV
Meg22_1214_Bin_175_scaffold_4657_21
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(21569..21730)
DNA (162bp) protein (54aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=994838 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'.;"
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS' RepID=F2UU80_9EURY
Meg22_1214_Bin_175_scaffold_4657_22
AR20, Woesearchaeaota, DPANN, Archaea

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comp(21780..22562)
DNA (783bp) protein (261aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA-processing protein RRP42
Tax=AR20
Meg22_1214_Bin_175_scaffold_4657_23
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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comp(22559..23953)
DNA (1395bp) protein (465aa)
Putative exosome complex RNA-binding protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4_'5-way FS' RepID=F2UTS7_9EURY
Putative exosome complex RNA-binding protein {ECO:0000313|EMBL:EGD71840.1}; TaxID=994837 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4_'5-way FS'.;"
Hypothetical protein
Meg22_1214_Bin_175_scaffold_4657_24

Not on your lists

comp(23969..24688)
DNA (720bp) protein (240aa)
3' exoribonuclease id=5800800 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
3' exoribonuclease {ECO:0000313|EMBL:AJF62130.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
exosome complex exonuclease Rrp41
Meg22_1214_Bin_175_scaffold_4657_25
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(24707..25411)
DNA (705bp) protein (235aa)
Probable exosome complex RNA-binding protein 1 id=5800799 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative exosome complex RNA-binding protein 1
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1214_Bin_175_scaffold_4657_26
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(25439..26128)
DNA (690bp) protein (230aa)
Ribosome maturation protein SBDS n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XML2_METZD
Ribosome maturation protein SBDS
Ribosome maturation protein SBDS {ECO:0000313|EMBL:AEH61027.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
Meg22_1214_Bin_175_scaffold_4657_27

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comp(26135..26845)
DNA (711bp) protein (237aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA {ECO:0000256|HAMAP-Rule:MF_00289}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Proteasome subunit alpha
Meg22_1214_Bin_175_scaffold_4657_28
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(26847..27176)
DNA (330bp) protein (110aa)
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] id=5045732 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribonuclease P protein component 2
Tax=AR9
Meg22_1214_Bin_175_scaffold_4657_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(27274..28182)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D7941
tfe; transcription factor E
Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying items 1-30 of 43 in total

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