ggKbase home page

Meg22_1214_Bin_175_scaffold_10254

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_175_scaffold_10254_1
unknown

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_2
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(303..1166)
DNA (864bp) protein (288aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
Meg22_1214_Bin_175_scaffold_10254_3
unknown

Not on your lists

comp(1380..1802)
DNA (423bp) protein (141aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_trna_1
unknown

Not on your lists

2028..2099
DNA (72bp)
transferRNA Gly
Meg22_1214_Bin_175_scaffold_10254_4
unknown

Not on your lists

comp(2118..2423)
DNA (306bp) protein (102aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_5
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

2539..3543
DNA (1005bp) protein (335aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
Wyosine base formation family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG85_ACIB4
Wyosine base formation domain protein
Meg22_1214_Bin_175_scaffold_10254_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(3732..4304)
DNA (573bp) protein (191aa)
SSU ribosomal protein S3Ae n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TN6_METBU
30S ribosomal protein S3Ae
Tax=CG_Woesearch_02
Meg22_1214_Bin_175_scaffold_10254_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(4479..5321)
DNA (843bp) protein (281aa)
Putative uncharacterized protein id=5041674 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
exodeoxyribonuclease V subunit beta
Tax=CG_Aenigma_01
Meg22_1214_Bin_175_scaffold_10254_8
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(5692..6147)
DNA (456bp) protein (152aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTM2_METIM
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Meg22_1214_Bin_175_scaffold_10254_9
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

comp(6266..6691)
DNA (426bp) protein (142aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQR4_CLOSH
Tax=CG_CP02_01
Meg22_1214_Bin_175_scaffold_10254_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(6703..7296)
DNA (594bp) protein (198aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] id=18248002 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
O-sialoglycoprotein endopeptidase
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_175_scaffold_10254_11
unknown

Not on your lists

7353..8453
DNA (1101bp) protein (367aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_12
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists


comp(8450..9433)
DNA (984bp) protein (328aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJS3_ACIS0
metallohydrolase, glycoprotease/Kae1 family
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:AGB04270.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
Meg22_1214_Bin_175_scaffold_10254_13
unknown

Not on your lists

9537..10343
DNA (807bp) protein (269aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_14
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10356..10541)
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae n=1 Tax=uncultured archaeon MedDCM-OCT-S06-C18 RepID=D6PBS8_9ARCH
Tax=CG_Pacearch_02
Meg22_1214_Bin_175_scaffold_10254_15
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(10542..10850)
DNA (309bp) protein (103aa)
30S ribosomal protein S24e n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS24_PYRHO
30S ribosomal protein S24e
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
Meg22_1214_Bin_175_scaffold_10254_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10857..11042)
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BU98_METCG
rpoE2; DNA-directed RNA polymerase subunit E'
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Meg22_1214_Bin_175_scaffold_10254_17
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(11170..11781)
DNA (612bp) protein (204aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase
Meg22_1214_Bin_175_scaffold_10254_18
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(11791..12156)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DRD6_METV3
PilT protein domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ADI35696.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
Meg22_1214_Bin_175_scaffold_10254_19
unknown

Not on your lists

12202..12672
DNA (471bp) protein (157aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_20
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(12829..14049)
DNA (1221bp) protein (407aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQF3_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
small GTP-binding protein
Meg22_1214_Bin_175_scaffold_10254_21

Not on your lists

comp(14116..14460)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DJ4_METBF
Uncharacterized protein {ECO:0000313|EMBL:KHO53286.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
Meg22_1214_Bin_175_scaffold_10254_22
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14460..15635)
DNA (1176bp) protein (392aa)
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase id=5799766 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
Meg22_1214_Bin_175_scaffold_10254_23
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15690..16607)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000369934C
thioredoxin reductase
Tax=CG_Pacearch_04
Meg22_1214_Bin_175_scaffold_10254_24
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16600..16926)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036C4E53
thioredoxin
Tax=AR13
Meg22_1214_Bin_175_scaffold_10254_25
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


comp(17087..17503)
DNA (417bp) protein (139aa)
30S ribosomal protein S6e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RI14_ARCPA
30S ribosomal protein S6e
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
Meg22_1214_Bin_175_scaffold_10254_26
unknown

Not on your lists

comp(17640..18008)
DNA (369bp) protein (123aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_10254_trna_2
unknown

Not on your lists

18146..18218
DNA (73bp)
transferRNA Val
Meg22_1214_Bin_175_scaffold_10254_27
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18264..20153
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZP0_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB50155.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
Meg22_1214_Bin_175_scaffold_10254_28
unknown

Not on your lists

comp(20171..20581)
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying items 1-30 of 59 in total

View Taxonomy