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Meg22_1214_Bin_175_scaffold_35235

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_175_scaffold_35235_1
CG_Woesearch_02, Woesearchaeota, Archaea

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3..2441
DNA (2439bp) protein (813aa)
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
Tax=CG_Woesearch_02
Meg22_1214_Bin_175_scaffold_35235_2
unknown

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comp(2454..2891)
DNA (438bp) protein (146aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_35235_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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2957..3850
DNA (894bp) protein (298aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_175_scaffold_35235_trna_1
unknown

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3943..4014
DNA (72bp)
transferRNA Asn
Meg22_1214_Bin_175_scaffold_35235_4

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4122..5591
DNA (1470bp) protein (490aa)
Putative hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T7Z1_9ARCH
Marine sediment metagenome DNA, contig: S01H4_C02994 {ECO:0000313|EMBL:GAG71009.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA-metabolising metallo-beta-lactamase
Meg22_1214_Bin_175_scaffold_35235_5
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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5651..5866
DNA (216bp) protein (72aa)
Transcription factor CBF/NF-Y/histone domain protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGG7_METVM
Archaeal histone {ECO:0000313|EMBL:AKG92169.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
Transcription factor CBF/NF-Y/histone domain-containing protein
Meg22_1214_Bin_175_scaffold_35235_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5969..8086
DNA (2118bp) protein (706aa)
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=5047674 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA topoisomerase I
Tax=RBG_16_Micrarchaeota_36_9_curated
Displaying 7 items

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