ggKbase home page

Meg22_1214_Bin_209_scaffold_1589

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_209_scaffold_1589_1
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

137..667
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382DD02
Recombinase
Tax=AR13
Meg22_1214_Bin_209_scaffold_1589_2
unknown

Not on your lists

726..1319
DNA (594bp) protein (198aa)

This feature has no annotations

Meg22_1214_Bin_209_scaffold_1589_3

Not on your lists


comp(1308..1709)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S037_FERPA
Marine sediment metagenome DNA, contig: S03H2_S00319 {ECO:0000313|EMBL:GAH52189.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S9
Meg22_1214_Bin_209_scaffold_1589_4
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(1706..2095)
DNA (390bp) protein (130aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13P
Tax=AR13
Meg22_1214_Bin_209_scaffold_1589_5

Not on your lists


comp(2092..2460)
DNA (369bp) protein (123aa)
50S ribosomal protein L18e n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL18E_ARCFU
Large subunit ribosomal protein L18e {ECO:0000313|EMBL:KHO55550.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Ribosomal protein L18E
Meg22_1214_Bin_209_scaffold_1589_trna_6
unknown

Not on your lists

comp(2771..2854)
DNA (84bp)
transferRNA Leu
Meg22_1214_Bin_209_scaffold_1589_6

Not on your lists

comp(2902..3615)
DNA (714bp) protein (238aa)
DNA-directed RNA polymerase subunit D {ECO:0000313|EMBL:KHO55449.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO55449.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
Meg22_1214_Bin_209_scaffold_1589_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(3650..4042)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus zilligii RepID=UPI000299D2B8
SSU ribosomal protein S14e (S11p)
Tax=AR19
Meg22_1214_Bin_209_scaffold_1589_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(4035..4649)
DNA (615bp) protein (205aa)
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_209_scaffold_1589_9
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


comp(4651..5118)
DNA (468bp) protein (156aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
Tax=CG_Pacearch_01
Meg22_1214_Bin_209_scaffold_1589_10

Not on your lists

comp(5150..5683)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55445.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Meg22_1214_Bin_209_scaffold_1589_11
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5692..5979)
DNA (288bp) protein (96aa)
Tax=AR13
Meg22_1214_Bin_209_scaffold_1589_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


comp(5976..6227)
DNA (252bp) protein (84aa)
50S ribosomal protein L21e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL21_METKA
RPL21A; 50S ribosomal protein L21
Tax=CG_Pacearch_01
Meg22_1214_Bin_209_scaffold_1589_13
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6279..6485)
DNA (207bp) protein (69aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_209_scaffold_1589_14

Not on your lists

comp(6581..9157)
DNA (2577bp) protein (859aa)
Ca2+-transporting ATPase (EC:3.6.3.8)
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5241768 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:KHO52769.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Meg22_1214_Bin_209_scaffold_1589_15
unknown

Not on your lists

comp(9192..9293)
DNA (102bp) protein (34aa)

This feature has no annotations

Meg22_1214_Bin_209_scaffold_1589_16
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


9343..9540
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=CG_Pacearch_04
Meg22_1214_Bin_209_scaffold_1589_17

Not on your lists

comp(9543..9797)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50286.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Meg22_1214_Bin_209_scaffold_1589_trna_5
unknown

Not on your lists

comp(10049..10132)
DNA (84bp)
transferRNA Leu
Meg22_1214_Bin_209_scaffold_1589_trna_1
unknown

Not on your lists

10400..10474
DNA (75bp)
transferRNA Arg
Meg22_1214_Bin_209_scaffold_1589_18
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

10636..10983
DNA (348bp) protein (116aa)
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9G7_METFA
Meg22_1214_Bin_209_scaffold_1589_19
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10976..11257
DNA (282bp) protein (94aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SL12_CLOC7
phosphoribosyl-ATP diphosphatase
Meg22_1214_Bin_209_scaffold_1589_20
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(11333..11980)
DNA (648bp) protein (216aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P5F8_METFA
Meg22_1214_Bin_209_scaffold_1589_21
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(11997..12620)
DNA (624bp) protein (208aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=3327401 bin=GWA1_Kazan_50_15 species=unknown genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
Tax=CG_Woesearch_03
Meg22_1214_Bin_209_scaffold_1589_22
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


comp(13003..14190)
DNA (1188bp) protein (396aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQ62_ALKMQ
Tax=CG_Pacearch_04
Meg22_1214_Bin_209_scaffold_1589_trna_4
unknown

Not on your lists

comp(14144..14214)
DNA (71bp)
transferRNA His
Meg22_1214_Bin_209_scaffold_1589_trna_2
unknown

Not on your lists

14511..14582
DNA (72bp)
transferRNA Gly
Meg22_1214_Bin_209_scaffold_1589_23
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

14591..15631
DNA (1041bp) protein (347aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5047438 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
preprotein translocase subunit SecF
Tax=AR4
Meg22_1214_Bin_209_scaffold_1589_24

Not on your lists

15628..17160
DNA (1533bp) protein (511aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY id=5102895 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SecD/SecF/SecDF export membrane protein {ECO:0000313|EMBL:KHO52336.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
SecD/SecF/SecDF export membrane protein
Meg22_1214_Bin_209_scaffold_1589_25
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17157..18146)
DNA (990bp) protein (330aa)
Glycosyl transferase, family 4 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7Q8_METTP
glycosyl transferase family protein
Tax=RBG_16_Pacearchaeota_35_8_curated
Displaying items 1-30 of 90 in total

View Taxonomy