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Meg22_1214_Bin_270_scaffold_6277

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_270_scaffold_6277_1

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comp(1..669)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00035CC075
Marine sediment metagenome DNA, contig: S01H1_L05529 {ECO:0000313|EMBL:GAF81953.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_270_scaffold_6277_trna_6
unknown

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comp(843..915)
DNA (73bp)
transferRNA Cys
Meg22_1214_Bin_270_scaffold_6277_trna_5
unknown

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comp(933..1024)
DNA (92bp)
transferRNA Arg
Meg22_1214_Bin_270_scaffold_6277_2

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comp(1121..2026)
DNA (906bp) protein (302aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
Meg22_1214_Bin_270_scaffold_6277_3

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comp(2196..2447)
DNA (252bp) protein (84aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKK90176.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Like-Sm ribonucleoprotein core
Meg22_1214_Bin_270_scaffold_6277_4

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2535..2894
DNA (360bp) protein (120aa)
30S ribosomal protein S8e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGC7_ARCPA
Uncharacterized protein {ECO:0000313|EMBL:KKK90175.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S8e
Meg22_1214_Bin_270_scaffold_6277_5

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3118..4041
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AB4A9
Marine sediment metagenome DNA, contig: S06H3_L01682 {ECO:0000313|EMBL:GAI07756.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transcription initiation factor IIB
Meg22_1214_Bin_270_scaffold_6277_trna_1
unknown

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4099..4182
DNA (84bp)
transferRNA Leu
Meg22_1214_Bin_270_scaffold_6277_6

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comp(4197..10664)
DNA (6468bp) protein (2156aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO48590.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Lytic murein transglycosylase
Meg22_1214_Bin_270_scaffold_6277_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(10661..12547)
DNA (1887bp) protein (629aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_270_scaffold_6277_8
AR13, Pacearchaeaota, DPANN, Archaea

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comp(12588..12794)
DNA (207bp) protein (69aa)
Tax=AR13
Meg22_1214_Bin_270_scaffold_6277_trna_2
unknown

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12851..12921
DNA (71bp)
transferRNA Val
Meg22_1214_Bin_270_scaffold_6277_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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12963..13277
DNA (315bp) protein (105aa)
50S ribosomal protein L44E; K02929 large subunit ribosomal protein L44e id=5048709 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_270_scaffold_6277_10

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13455..14003
DNA (549bp) protein (183aa)
Marine sediment metagenome DNA, contig: S03H2_S23408 {ECO:0000313|EMBL:GAH85563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
Meg22_1214_Bin_270_scaffold_6277_trna_3
unknown

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14100..14186
DNA (87bp)
transferRNA Thr
Meg22_1214_Bin_270_scaffold_6277_11

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comp(14211..14537)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW4_9ZZZZ
Marine sediment metagenome DNA, contig: S12H4_S05666 {ECO:0000313|EMBL:GAJ01779.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1214_Bin_270_scaffold_6277_12

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comp(14534..14725)
DNA (192bp) protein (64aa)
Marine sediment metagenome DNA, contig: S12H4_S05666 {ECO:0000313|EMBL:GAJ01776.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_270_scaffold_6277_13

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comp(14760..15311)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Marine sediment metagenome DNA, contig: S12H4_C05726 {ECO:0000313|EMBL:GAI82598.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_270_scaffold_6277_14

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comp(15308..15952)
DNA (645bp) protein (215aa)
Marine sediment metagenome DNA, contig: S01H1_L04355 {ECO:0000313|EMBL:GAF84066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Exonuclease RNase T and DNA polymerase III id=4058342 bin=GWF2_Bacteroidetes_41_9 species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Meg22_1214_Bin_270_scaffold_6277_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(16019..17260)
DNA (1242bp) protein (414aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_270_scaffold_6277_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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17445..18419
DNA (975bp) protein (325aa)
Signal recognition particle GTPase n=1 Tax=sediment metagenome RepID=D9PEV9_9ZZZZ
Signal recognition particle GTPase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_270_scaffold_6277_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(18470..19615)
DNA (1146bp) protein (382aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALL5_METOI
major facilitator superfamily protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_270_scaffold_6277_18
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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19692..21062
DNA (1371bp) protein (457aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
SRP54-type protein, GTPase protein
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_270_scaffold_6277_19
CG_Pacearch_01, Pacearchaeota, Archaea

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21059..21463
DNA (405bp) protein (135aa)
Tax=CG_Pacearch_01
Meg22_1214_Bin_270_scaffold_6277_20
unknown

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21460..21699
DNA (240bp) protein (80aa)

This feature has no annotations

Meg22_1214_Bin_270_scaffold_6277_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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21696..22412
DNA (717bp) protein (239aa)
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57)
Mn2+dependent serine/threonine protein kinase id=4922345 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1214_Bin_270_scaffold_6277_trna_4
unknown

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comp(22413..22485)
DNA (73bp)
transferRNA Gln
Meg22_1214_Bin_270_scaffold_6277_22

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comp(22532..23326)
DNA (795bp) protein (265aa)
Septum site-determining protein MinD {ECO:0000313|EMBL:KHO55364.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
cell division inhibitor; K03609 septum site-determining protein MinD id=5045746 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division inhibitor minD - like protein
Displaying 28 items

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