ggKbase home page

Meg22_1214_Bin_51_scaffold_2950

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_51_scaffold_2950_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
Tax=CG_Pacearch_03
Meg22_1214_Bin_51_scaffold_2950_2
unknown

Not on your lists

381..1178
DNA (798bp) protein (266aa)

This feature has no annotations

Meg22_1214_Bin_51_scaffold_2950_trna_1
unknown

Not on your lists

1418..1490
DNA (73bp)
transferRNA Cys
Meg22_1214_Bin_51_scaffold_2950_3
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1520..2422)
DNA (903bp) protein (301aa)
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
Tax=AR13
Meg22_1214_Bin_51_scaffold_2950_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2564..2815)
DNA (252bp) protein (84aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY
Like-Sm ribonucleoprotein core
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_51_scaffold_2950_5

Not on your lists

2903..3268
DNA (366bp) protein (122aa)
30S ribosomal protein S8e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGC7_ARCPA
Marine sediment metagenome DNA, contig: S03H2_S04643 {ECO:0000313|EMBL:GAH56453.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S8e
Meg22_1214_Bin_51_scaffold_2950_6
unknown

Not on your lists

3313..3414
DNA (102bp) protein (34aa)

This feature has no annotations

Meg22_1214_Bin_51_scaffold_2950_7
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3641..4567
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AB4A9
Transcription initiation factor IIB
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_51_scaffold_2950_8
unknown

Not on your lists

comp(4568..4801)
DNA (234bp) protein (78aa)

This feature has no annotations

Meg22_1214_Bin_51_scaffold_2950_trna_5
unknown

Not on your lists

comp(5041..5180)
DNA (140bp)
transferRNA Leu
Meg22_1214_Bin_51_scaffold_2950_9

Not on your lists

comp(5267..12082)
DNA (6816bp) protein (2272aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO48590.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Lytic murein transglycosylase
Meg22_1214_Bin_51_scaffold_2950_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12079..13905)
DNA (1827bp) protein (609aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_51_scaffold_2950_11
unknown

Not on your lists

comp(14173..14385)
DNA (213bp) protein (71aa)

This feature has no annotations

Meg22_1214_Bin_51_scaffold_2950_trna_2
unknown

Not on your lists

14492..14563
DNA (72bp)
transferRNA Val
Meg22_1214_Bin_51_scaffold_2950_12
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14659..14976
DNA (318bp) protein (106aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1214_Bin_51_scaffold_2950_13

Not on your lists


14978..15556
DNA (579bp) protein (193aa)
Marine sediment metagenome DNA, contig: S03H2_S23408 {ECO:0000313|EMBL:GAH85563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
Meg22_1214_Bin_51_scaffold_2950_trna_3
unknown

Not on your lists

15593..15664
DNA (72bp)
transferRNA Thr
Meg22_1214_Bin_51_scaffold_2950_14

Not on your lists

comp(15700..16026)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW4_9ZZZZ
Marine sediment metagenome DNA, contig: S12H4_S05666 {ECO:0000313|EMBL:GAJ01779.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1214_Bin_51_scaffold_2950_15

Not on your lists

comp(16023..16232)
DNA (210bp) protein (70aa)
Marine sediment metagenome DNA, contig: S12H4_S05666 {ECO:0000313|EMBL:GAJ01776.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_51_scaffold_2950_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(16267..16821)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_51_scaffold_2950_17

Not on your lists

comp(16926..18167)
DNA (1242bp) protein (414aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) {ECO:0000313|EMBL:EFK97897.1}; EC=5.4.2.1 {ECO:0000313|EMBL:EFK97897.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
Meg22_1214_Bin_51_scaffold_2950_18
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18294..19331
DNA (1038bp) protein (346aa)
Signal recognition particle GTPase n=1 Tax=sediment metagenome RepID=D9PEV9_9ZZZZ
Signal recognition particle GTPase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_51_scaffold_2950_19
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20008..21150)
DNA (1143bp) protein (381aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALL5_METOI
major facilitator superfamily protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_51_scaffold_2950_20

Not on your lists


21202..22569
DNA (1368bp) protein (456aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
SRP54-type protein, GTPase domain {ECO:0000313|EMBL:EFK97893.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
SRP54-type protein, GTPase protein
Meg22_1214_Bin_51_scaffold_2950_21
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

22569..23177
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BC5F7
O-sialoglycoprotein endopeptidase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_51_scaffold_2950_trna_4
unknown

Not on your lists

comp(23264..23336)
DNA (73bp)
transferRNA Gln
Meg22_1214_Bin_51_scaffold_2950_22

Not on your lists

comp(23441..24238)
DNA (798bp) protein (266aa)
Septum site-determining protein MinD {ECO:0000313|EMBL:KHO55364.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
cell division inhibitor; K03609 septum site-determining protein MinD id=5045746 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division inhibitor minD - like protein
Meg22_1214_Bin_51_scaffold_2950_23

Not on your lists

24309..24632
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48565.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Meg22_1214_Bin_51_scaffold_2950_24
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

24700..26034
DNA (1335bp) protein (445aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_51_scaffold_2950_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

26073..26780
DNA (708bp) protein (236aa)
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
VacB2; hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Displaying items 1-30 of 45 in total

View Taxonomy