ggKbase home page

Meg22_1214_Bin_73_scaffold_4858

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_73_scaffold_4858_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(49..840)
DNA (792bp) protein (264aa)
DNA-directed RNA polymerase subunit D n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX00_FERPA
RNA polymerase insert
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1214_Bin_73_scaffold_4858_2
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(837..1412)
DNA (576bp) protein (192aa)
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11
Tax=CG_Woesearch_01
Meg22_1214_Bin_73_scaffold_4858_3
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(1415..1981)
DNA (567bp) protein (189aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus sp. AM4 RepID=B7R327_9EURY
30S ribosomal protein S9
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
Meg22_1214_Bin_73_scaffold_4858_4
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(1998..2483)
DNA (486bp) protein (162aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A4ACD
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
rps13p; 30S ribosomal protein S13P
Meg22_1214_Bin_73_scaffold_4858_trna_2
unknown

Not on your lists

comp(2561..2645)
DNA (85bp)
transferRNA Ser
Meg22_1214_Bin_73_scaffold_4858_5
unknown

Not on your lists

comp(2709..5081)
DNA (2373bp) protein (791aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_4858_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

5154..5792
DNA (639bp) protein (213aa)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase small
Tax=AR15
Meg22_1214_Bin_73_scaffold_4858_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5767..6711)
DNA (945bp) protein (315aa)
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H/ACA RNA-protein complex component Cbf5p
Tax=AR15
Meg22_1214_Bin_73_scaffold_4858_8
unknown

Not on your lists

comp(6760..7320)
DNA (561bp) protein (187aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_4858_9
unknown

Not on your lists

7378..7776
DNA (399bp) protein (133aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_4858_10

Not on your lists

comp(7915..8238)
DNA (324bp) protein (108aa)
50S ribosomal protein L14e n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALY6_METOI id=5103278 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L14e
50S ribosomal protein L14e {ECO:0000313|EMBL:AJF62559.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_73_scaffold_4858_11

Not on your lists

comp(8285..8944)
DNA (660bp) protein (220aa)
Cytidylate kinase (Cmk) {ECO:0000313|EMBL:AIE93361.1}; EC=2.7.4.14 {ECO:0000313|EMBL:AIE93361.1};; TaxID=1455909 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_33_G09.;"
cmk; Cytidylate kinase (EC:2.7.4.25)
Putative adenylate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ART5_9ARCH
Meg22_1214_Bin_73_scaffold_4858_12
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(8993..9250)
DNA (258bp) protein (86aa)
50S ribosomal protein L34e n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=RL34_THEON
rpl34e; 50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000255|HAMAP-Rule:MF_00349}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (strain NA1).;"
Meg22_1214_Bin_73_scaffold_4858_13
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9297..9746)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
Meg22_1214_Bin_73_scaffold_4858_14
unknown

Not on your lists

comp(9794..10621)
DNA (828bp) protein (276aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_4858_15
unknown

Not on your lists

comp(10640..10774)
DNA (135bp) protein (45aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_4858_16

Not on your lists

comp(10878..12248)
DNA (1371bp) protein (457aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_73_scaffold_4858_17

Not on your lists


comp(12238..12618)
DNA (381bp) protein (127aa)
50S ribosomal protein L15 n=1 Tax=Clostridium sp. CAG:1193 RepID=R5IXA9_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15
Meg22_1214_Bin_73_scaffold_4858_18

Not on your lists


comp(12628..12978)
DNA (351bp) protein (117aa)
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5042322 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L30, large subunit ribosomal protein L30 {ECO:0000313|EMBL:KHO46820.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L30P
Meg22_1214_Bin_73_scaffold_4858_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(12978..13709)
DNA (732bp) protein (244aa)
Ribosomal protein S5 id=5800043 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S5
Tax=CG_Woesearch_02
Meg22_1214_Bin_73_scaffold_4858_20
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(13690..14208)
DNA (519bp) protein (173aa)
50S ribosomal protein L18P n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRT3_METIM
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Meg22_1214_Bin_73_scaffold_4858_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(14208..14753)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381F97D
50S ribosomal protein L19
Tax=CG_Woesearch_02
Meg22_1214_Bin_73_scaffold_4858_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14915..15541)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037197A6
50S ribosomal protein L32e
Tax=CG_Woesearch_02
Meg22_1214_Bin_73_scaffold_4858_23
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(15547..16077)
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM73_METOI
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1).;"
Meg22_1214_Bin_73_scaffold_4858_24

Not on your lists


comp(16090..16479)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRT7_METIM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
Meg22_1214_Bin_73_scaffold_4858_25
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16484..16723)
DNA (240bp) protein (80aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5046853 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR17
Meg22_1214_Bin_73_scaffold_4858_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(16720..17241)
DNA (522bp) protein (174aa)
50S ribosomal protein L5 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CFB8D
50S ribosomal protein L5
Tax=CG_Woesearch_02
Meg22_1214_Bin_73_scaffold_4858_27
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17247..17960)
DNA (714bp) protein (238aa)
30S ribosomal protein S4e n=2 Tax=unclassified Thermoplasmatales RepID=M7U2B6_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
SSU ribosomal protein S4E
Meg22_1214_Bin_73_scaffold_4858_28
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(17957..18331)
DNA (375bp) protein (125aa)
50S ribosomal protein L24P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UUZ1_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
ribosomal protein L24
Meg22_1214_Bin_73_scaffold_4858_29
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(18335..18739)
DNA (405bp) protein (135aa)
50S ribosomal protein L14 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRU2_METIM
50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Displaying items 1-30 of 59 in total

View Taxonomy