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Meg22_1214_Bin_73_scaffold_34692

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_73_scaffold_34692_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12..191)
DNA (180bp) protein (60aa)
Protein containing 4Fe-4S binding domain n=1 Tax=sediment metagenome RepID=D9PK77_9ZZZZ
Ferredoxin
Tax=CG_Woesearch_02
Meg22_1214_Bin_73_scaffold_34692_2

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comp(314..865)
DNA (552bp) protein (184aa)
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
TATA-box-binding protein
2-alkenal reductase; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5048857 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Meg22_1214_Bin_73_scaffold_34692_3

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comp(1022..4165)
DNA (3144bp) protein (1048aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Isoleucine-tRNA ligase {ECO:0000313|EMBL:AJF61934.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Meg22_1214_Bin_73_scaffold_34692_4
unknown

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4340..4969
DNA (630bp) protein (210aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_34692_5
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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4976..6079
DNA (1104bp) protein (368aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSC5_METIM
SMC domain protein
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Meg22_1214_Bin_73_scaffold_34692_6
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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6135..7097
DNA (963bp) protein (321aa)
Replication factor C small subunit n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9H4_METFA
rfc; replication factor C small subunit
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
Meg22_1214_Bin_73_scaffold_34692_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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7108..8271
DNA (1164bp) protein (388aa)
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1214_Bin_73_scaffold_34692_8
unknown

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8336..9619
DNA (1284bp) protein (428aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_34692_9

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9933..11909
DNA (1977bp) protein (659aa)
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY id=5103224 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication initiator Cdc21/Cdc54
DNA replication initiator Cdc21/Cdc54 {ECO:0000313|EMBL:AJF62505.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_73_scaffold_34692_10
AR20, Woesearchaeaota, DPANN, Archaea

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11903..12472
DNA (570bp) protein (190aa)
Uncharacterized protein conserved in archaea n=2 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHY8_9EURY id=5103225 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
Meg22_1214_Bin_73_scaffold_34692_11
MPI_TA06_32_111, Bacteria

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12531..13454
DNA (924bp) protein (308aa)
Na+/Ca+ antiporter, CaCA family id=3104544 bin=GWC1_Spirochaetes_27_15 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
CaCA family Na+/Ca+ antiporter
Tax=MPI_TA06_32_111
Meg22_1214_Bin_73_scaffold_34692_12
unknown

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13451..14053
DNA (603bp) protein (201aa)

This feature has no annotations

Meg22_1214_Bin_73_scaffold_34692_13
CG_Micra_05, Micraarchaeota, Archaea

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14213..14536
DNA (324bp) protein (108aa)
Transcriptional repressor NrdR n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q229_CALOW
ATP-cone domain-containing protein
Tax=CG_Micra_05
Displaying 13 items

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