ggKbase home page

Meg22_1416_Bin_185_scaffold_2544

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_185_scaffold_2544_1
unknown

Not on your lists

3..185
DNA (183bp) protein (61aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_2544_2
unknown

Not on your lists

comp(182..658)
DNA (477bp) protein (159aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_2544_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(655..1038)
DNA (384bp) protein (128aa)
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_2544_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(1043..1420)
DNA (378bp) protein (126aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_2544_trna_1
unknown

Not on your lists

comp(1799..1872)
DNA (74bp)
transferRNA Arg
Meg22_1416_Bin_185_scaffold_2544_5
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

1982..2254
DNA (273bp) protein (91aa)
50S ribosomal protein L34e n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=RL34_HYPBU
rpl34e; 50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000255|HAMAP-Rule:MF_00349}; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus butylicus (strain DSM 5456 / JCM 9403).;"
Meg22_1416_Bin_185_scaffold_2544_6
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

2276..2755
DNA (480bp) protein (160aa)
50S ribosomal protein L14e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL14E_METKA
RPL14A; 50S ribosomal protein L14
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1416_Bin_185_scaffold_2544_7
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(2760..3521)
DNA (762bp) protein (254aa)
Putative uncharacterized protein id=2869802 bin=GWF1_Spirochaetes_51_8 species=Thaumarchaeota archaeon SCGC AB-539-E09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
tRNA (adenine-N(1)-)-methyltransferase
Tax=GWF1_Spirochaetes_49_6_curated
Meg22_1416_Bin_185_scaffold_2544_8
unknown

Not on your lists

3573..4181
DNA (609bp) protein (203aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_2544_9
unknown

Not on your lists

comp(4178..4348)
DNA (171bp) protein (57aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_2544_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4365..4799)
DNA (435bp) protein (145aa)
Uncharacterized protein id=18248821 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_1416_Bin_185_scaffold_2544_11

Not on your lists

comp(4827..5843)
DNA (1017bp) protein (339aa)
Pyruvate-formate lyase-activating enzyme, PflA n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BK43_HYPBU
Marine sediment metagenome DNA, contig: S01H4_C00006 {ECO:0000313|EMBL:GAG60818.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
pyruvate-formate lyase-activating enzyme, PflA
Meg22_1416_Bin_185_scaffold_2544_12

Not on your lists

5932..6216
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAR9_9ARCH
Marine sediment metagenome DNA, contig: S01H4_L03864 {ECO:0000313|EMBL:GAG78714.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rubrerythrin
Meg22_1416_Bin_185_scaffold_2544_13
unknown

Not on your lists

6213..6491
DNA (279bp) protein (93aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_2544_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6658..7137
DNA (480bp) protein (160aa)
Histidine triad (HIT) protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KZB5_9EURY
histidine triad (HIT) protein
Tax=CG_Woesearch_02
Meg22_1416_Bin_185_scaffold_2544_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7486..8124
DNA (639bp) protein (213aa)
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1416_Bin_185_scaffold_2544_16
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

8132..8482
DNA (351bp) protein (117aa)
Tax=AR17
Meg22_1416_Bin_185_scaffold_2544_17
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

8493..8891
DNA (399bp) protein (133aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
Tax=AR20
Meg22_1416_Bin_185_scaffold_2544_18
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(8893..9825)
DNA (933bp) protein (311aa)
ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5044311 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ribonuclease Z
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1416_Bin_185_scaffold_2544_19
unknown

Not on your lists

9912..10319
DNA (408bp) protein (136aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_2544_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

10341..11399
DNA (1059bp) protein (353aa)
hypothetical protein
NurA domain id=5241666 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_2544_21
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11431..12675
DNA (1245bp) protein (415aa)
Nucleotidyltransferase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLT9_THELI
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:EHR79091.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
Meg22_1416_Bin_185_scaffold_2544_22
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12716..13642
DNA (927bp) protein (309aa)
RNA methylase, NOL1/NOP2/sun family (EC:2.1.1.29)
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA
RNA methylase, NOL1/NOP2/sun family {ECO:0000313|EMBL:ADC66647.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
Meg22_1416_Bin_185_scaffold_2544_23
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

13639..14100
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XXT8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK60404.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
Meg22_1416_Bin_185_scaffold_2544_24
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


14154..15395
DNA (1242bp) protein (414aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM
small GTP-binding protein
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Meg22_1416_Bin_185_scaffold_2544_25

Not on your lists

15479..15883
DNA (405bp) protein (135aa)
Uncharacterized protein id=18248699 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO47534.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
Meg22_1416_Bin_185_scaffold_2544_26
GWA2_OD1_45_30, Parcubacteria, Bacteria

Not on your lists

15895..16458
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00037B1353
Adenylate cyclase {ECO:0000313|EMBL:KKU04284.1}; TaxID=1618834 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_45_30.;"
adenylate cyclase
Meg22_1416_Bin_185_scaffold_2544_27
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(16444..16656)
DNA (213bp) protein (71aa)
DNA-binding protein HMf-1 n=2 Tax=Methanothermus fervidus RepID=HMFA_METFE
transcription factor CBF/NF-Y/histone domain-containing protein
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1416_Bin_185_scaffold_2544_28
Cenarchaeum symbiosum, Cenarchaeum, Cenarchaeales, Thaumarchaeota, Archaea

Not on your lists

16770..16910
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RXN7_CENSY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK78104.1}; TaxID=414004 species="Archaea; Thaumarchaeota; Cenarchaeales; Cenarchaeaceae; Cenarchaeum.;" source="Cenarchaeum symbiosum (strain A).;"
Meg22_1416_Bin_185_scaffold_2544_29
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(16894..17808)
DNA (915bp) protein (305aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) id=5042154 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
NAD-dependent epimerase/dehydratase
Tax=CG_Micra_05
Displaying items 1-30 of 53 in total

View Taxonomy