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Meg22_1416_Bin_185_scaffold_6263

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_185_scaffold_6263_1
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1..192
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000313|EMBL:AEG18771.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AEG18771.1};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
DNA-directed RNA polymerase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3W9_METSW
Meg22_1416_Bin_185_scaffold_6263_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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202..393
DNA (192bp) protein (64aa)
Transcription elongation factor Spt4 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS4_METBF
DNA-directed RNA polymerase subunit E''
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
Meg22_1416_Bin_185_scaffold_6263_3

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381..800
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376F1AE
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1456556 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote SAT1000_07_H11.;"
30S ribosomal protein S24
Meg22_1416_Bin_185_scaffold_6263_4
AR5, Aenigmarchaeota, DPANN, Archaea

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745..978
DNA (234bp) protein (78aa)
rps27AE; 30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae id=5040679 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
30S ribosomal protein S27
Tax=AR5
Meg22_1416_Bin_185_scaffold_6263_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1043..2146
DNA (1104bp) protein (368aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQY4_SYNAS
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Meg22_1416_Bin_185_scaffold_6263_6
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2200..2694)
DNA (495bp) protein (165aa)
Phosphomethylpyrimidine kinase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D648_METSW
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AEG17696.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
Meg22_1416_Bin_185_scaffold_6263_7
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(2694..3365)
DNA (672bp) protein (224aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
Triosephosphate isomerase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=TPIS_PYRAB
Meg22_1416_Bin_185_scaffold_6263_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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3447..4793
DNA (1347bp) protein (449aa)
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_6263_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5229..5483
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72407.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Meg22_1416_Bin_185_scaffold_6263_10
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5447..5950
DNA (504bp) protein (168aa)
Acyl transferase family protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QD63_9FIRM
Acyl transferase family protein {ECO:0000313|EMBL:EKP94561.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
hypothetical protein
Meg22_1416_Bin_185_scaffold_6263_11
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5947..6528
DNA (582bp) protein (194aa)
membrane protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0002F5AC27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJV88510.1}; TaxID=1053201 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuA2-1.;"
Meg22_1416_Bin_185_scaffold_6263_12

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comp(6503..7534)
DNA (1032bp) protein (344aa)
RNA 3'-terminal phosphate cyclase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI52_PYRYC
Uncharacterized protein {ECO:0000313|EMBL:KKN97078.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA 3'-terminal-phosphate cyclase
Meg22_1416_Bin_185_scaffold_6263_13
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(7549..8754)
DNA (1206bp) protein (402aa)
Beta-lactamase domain protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAC1_METIK
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEF95811.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
Meg22_1416_Bin_185_scaffold_6263_14
CG_Micra_03, Micraarchaeota, Archaea

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comp(8830..9348)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036990F3
hypothetical protein
Tax=CG_Micra_03
Meg22_1416_Bin_185_scaffold_6263_15
AR10, Diapherotrites, DPANN, Archaea

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comp(9356..10264)
DNA (909bp) protein (303aa)
deoxyhypusine synthase (EC:2.5.1.46)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] id=5240806 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1416_Bin_185_scaffold_6263_16
unknown

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comp(10357..10719)
DNA (363bp) protein (121aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_6263_17

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10769..11842
DNA (1074bp) protein (358aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Uncharacterized protein id=5800116 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Meg22_1416_Bin_185_scaffold_6263_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11849..12487)
DNA (639bp) protein (213aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
Meg22_1416_Bin_185_scaffold_6263_19
unknown

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12708..13037
DNA (330bp) protein (110aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_6263_20
Acidianus hospitalis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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13228..14370
DNA (1143bp) protein (381aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=933801 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Acidianus hospitalis (strain W1).;"
Tryptophan--tRNA ligase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B969_ACIHW
tryptophanyl-tRNA synthetase
Meg22_1416_Bin_185_scaffold_6263_21
CG_Woesearch_02, Woesearchaeota, Archaea

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14638..15843
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECZ7_PYRF1
GTPase domain-containing protein
Tax=CG_Woesearch_02
Meg22_1416_Bin_185_scaffold_6263_22
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(15891..17384)
DNA (1494bp) protein (498aa)
glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC:1.2.1.9)
Aldehyde Dehydrogenase id=4268464 bin=GWF2_CPR3_35_18 species=Candidatus Parvarchaeum acidophilus genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWF2_CPR3_35_18 organism_group=CPR3
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_6263_23
AR5, Aenigmarchaeota, DPANN, Archaea

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17450..18196
DNA (747bp) protein (249aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] id=18248897 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
diphthine synthase (EC:2.1.1.98)
Tax=AR5
Meg22_1416_Bin_185_scaffold_6263_24
unknown

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comp(18180..18404)
DNA (225bp) protein (75aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_6263_25
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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18471..19271
DNA (801bp) protein (267aa)
50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=18248294 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L4P
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_6263_26
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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19264..19560
DNA (297bp) protein (99aa)
50S ribosomal protein L23P n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=RL23_THEON
rplW; 50S ribosomal protein L23
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_6263_27
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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19570..20241
DNA (672bp) protein (224aa)
50S ribosomal protein L2P id=4909359 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L2
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1416_Bin_185_scaffold_6263_28

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20253..20633
DNA (381bp) protein (127aa)
30S ribosomal protein S19P n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFU9_PYRYC
30S ribosomal protein S19P
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Meg22_1416_Bin_185_scaffold_6263_29

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20642..21025
DNA (384bp) protein (128aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=18248298 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L22
Meg22_1416_Bin_185_scaffold_6263_30
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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21034..21654
DNA (621bp) protein (207aa)
30S ribosomal protein S3 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VT91_9EURY
30S ribosomal protein S3
Tax=CG_Aenigma_01
Displaying items 1-30 of 39 in total

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