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Meg22_1416_Bin_185_scaffold_12312

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_185_scaffold_12312_1
CG_Woesearch_02, Woesearchaeota, Archaea

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2..1375
DNA (1374bp) protein (458aa)
putative hemolysin id=5046334 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1416_Bin_185_scaffold_12312_2
unknown

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1372..1536
DNA (165bp) protein (55aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_12312_3
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1988..2674
DNA (687bp) protein (229aa)
DNA repair and recombination protein RadB n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TA16_METSL
DNA repair and recombination protein radB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
Meg22_1416_Bin_185_scaffold_12312_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(2661..4730)
DNA (2070bp) protein (690aa)
DNA topoisomerase 1 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=TOP1_PYRAB
topA; DNA topoisomerase I
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_12312_5

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comp(4757..5023)
DNA (267bp) protein (89aa)
Peptidase U32 n=1 Tax=uncultured organism RepID=M1PQS3_9ZZZZ
Marine sediment metagenome DNA, contig: S01H4_C01490 {ECO:0000313|EMBL:GAG69854.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation elongation factor-like protein
Meg22_1416_Bin_185_scaffold_12312_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(5368..5865)
DNA (498bp) protein (166aa)
id=4761615 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_12312_7
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

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5923..6858
DNA (936bp) protein (312aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFB1_PYRYC
nicotinate-nucleotide pyrophosphorylase
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
Meg22_1416_Bin_185_scaffold_12312_8

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comp(6866..8005)
DNA (1140bp) protein (380aa)
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RG40_ARCPA
Marine sediment metagenome DNA, contig: S01H1_L06758 {ECO:0000313|EMBL:GAF80873.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1416_Bin_185_scaffold_12312_9
CG_Gottesman_01, Gottesmanbakteria, Microgenomates, Bacteria

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comp(8226..8441)
DNA (216bp) protein (72aa)
Tax=CG_Gottesman_01
Meg22_1416_Bin_185_scaffold_12312_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(8693..9490)
DNA (798bp) protein (266aa)
hypothetical protein; K07159 id=5042076 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
TIGR00162 family protein
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_12312_11
unknown

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comp(9714..10499)
DNA (786bp) protein (262aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_12312_12
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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10632..11258
DNA (627bp) protein (209aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FJQ2_9EURY
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_12312_13
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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11295..13169
DNA (1875bp) protein (625aa)
KH-domain/beta-lactamase-domain-containing protein; K07041 id=18248911 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
KH-domain/beta-lactamase-domain-containing protein
Tax=CG_Aenigma_01
Meg22_1416_Bin_185_scaffold_12312_14
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(13174..13527)
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=3526825 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_12312_15
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(13589..13843)
DNA (255bp) protein (85aa)
UPF0147 protein Mfer_0926 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZJ2_METFV
hypothetical protein
UPF0147 protein Mfer_0926 {ECO:0000256|HAMAP-Rule:MF_00342}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Meg22_1416_Bin_185_scaffold_12312_16
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(13849..14178)
DNA (330bp) protein (110aa)
Prefoldin subunit beta n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S610_METSF
prefoldin, beta subunit
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_12312_17
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14184..14321)
DNA (138bp) protein (46aa)
DNA-directed RNA polymerase subunit P {ECO:0000255|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00615};; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); (Pyrococcus kodakaraensis (strain KOD1)).;"
DNA-directed RNA polymerase subunit P n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RPOP_THEKO
DNA-directed RNA polymerase subunit P
Meg22_1416_Bin_185_scaffold_12312_18
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(14333..14554)
DNA (222bp) protein (74aa)
50S ribosomal protein L37Ae n=1 Tax=Methanobacterium sp. MB1 RepID=U6EA91_9EURY
hypothetical protein
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
Meg22_1416_Bin_185_scaffold_12312_19
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(14582..15364)
DNA (783bp) protein (261aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA-processing protein RRP42
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_12312_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(15365..16063)
DNA (699bp) protein (233aa)
Probable exosome complex exonuclease 1 id=4918923 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
exosome complex exonuclease Rrp41
Tax=AR5
Meg22_1416_Bin_185_scaffold_12312_21
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(16060..16758)
DNA (699bp) protein (233aa)
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5045975 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpr43; exosome RNA binding protein (EC:3.1.13.-)
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_185_scaffold_12312_22

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comp(16777..17481)
DNA (705bp) protein (235aa)
Predicted exosome subunit n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYB8_METKA
Marine sediment metagenome DNA, contig: S12H4_C01193 {ECO:0000313|EMBL:GAI72441.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA-associated protein
Meg22_1416_Bin_185_scaffold_12312_23
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(17497..18195)
DNA (699bp) protein (233aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha id=4918915 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1416_Bin_185_scaffold_12312_24

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18371..18913
DNA (543bp) protein (181aa)
DJ-1/PfpI family protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYS5_METCG
Marine sediment metagenome DNA, contig: S03H2_S02479 {ECO:0000313|EMBL:GAH61157.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DJ-1/PfpI family protein
Meg22_1416_Bin_185_scaffold_12312_25
unknown

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18907..19218
DNA (312bp) protein (104aa)

This feature has no annotations

Meg22_1416_Bin_185_scaffold_12312_trna_1
unknown

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18954..19104
DNA (151bp)
transferRNA Pseudo
Meg22_1416_Bin_185_scaffold_12312_26
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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comp(19105..19452)
DNA (348bp) protein (116aa)
arsC; arsenate reductase (EC:1.20.4.1)
protein-tyrosine phosphatase, low molecular weight id=1242302 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_13_Chloroflexi_51_36_curated
Meg22_1416_Bin_185_scaffold_12312_27
R_NC10_66_22, NC10, Bacteria

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comp(19511..20464)
DNA (954bp) protein (318aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK2_9BACT
peptidase S1 and S6, chymotrypsin/Hap
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 28 items

View Taxonomy