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Meg22_1416_Bin_28_scaffold_6768

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_28_scaffold_6768_1
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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2..205
DNA (204bp) protein (68aa)
UPF0251 protein CSE_02820 n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GI21_CALEA
hypothetical protein
Tax=CG_Caldi_01
Meg22_1416_Bin_28_scaffold_6768_2

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comp(215..1123)
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373FF6A
RNAse Z
Meg22_1416_Bin_28_scaffold_6768_3
unknown

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1180..1794
DNA (615bp) protein (205aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_4
unknown

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1797..2330
DNA (534bp) protein (178aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_5
unknown

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2389..2811
DNA (423bp) protein (141aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2808..3569)
DNA (762bp) protein (254aa)
Hydrolase, TatD family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL3_METFV id=5103022 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Hydrolase, TatD family
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_6768_7
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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3649..4257
DNA (609bp) protein (203aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Probable tRNA sulfurtransferase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTI5_METIM
thiamine biosynthesis/tRNA modification protein ThiI
Meg22_1416_Bin_28_scaffold_6768_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4273..5253)
DNA (981bp) protein (327aa)
Putative exonuclease of the beta-lactamase fold protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84958.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Meg22_1416_Bin_28_scaffold_6768_9
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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comp(5320..6225)
DNA (906bp) protein (302aa)
Band 7 protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUY3_9EURY
Band 7 protein {ECO:0000313|EMBL:EFD92910.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
hypothetical protein
Meg22_1416_Bin_28_scaffold_6768_10
unknown

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6331..6834
DNA (504bp) protein (168aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_11
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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6890..7078
DNA (189bp) protein (63aa)
30S ribosomal protein S17e n=1 Tax=Pyrococcus sp. ST04 RepID=I3RF30_9EURY
30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
Meg22_1416_Bin_28_scaffold_6768_12
unknown

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comp(7085..7624)
DNA (540bp) protein (180aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7689..10310)
DNA (2622bp) protein (874aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAX3_DEFDS
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_6768_14
unknown

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10458..11576
DNA (1119bp) protein (373aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_15
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11581..12078)
DNA (498bp) protein (166aa)
Endoribonuclease Nob1; Short=RNase Nob1;; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00265};; Endonuclease VapC14; Putative toxin VapC14 {ECO:0000255|HAMAP-Rule:MF_00265}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
Endoribonuclease Nob1 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=NOB1_PYRAB
hypothetical protein
Meg22_1416_Bin_28_scaffold_6768_16

Not on your lists

12135..12701
DNA (567bp) protein (189aa)
peptidase M50 id=5047436 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Peptidase M50 {ECO:0000313|EMBL:KHO45254.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
Meg22_1416_Bin_28_scaffold_6768_17
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12715..13542
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5F9N1_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH08535.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
Meg22_1416_Bin_28_scaffold_6768_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

13547..14470
DNA (924bp) protein (308aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1416_Bin_28_scaffold_6768_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

14569..14829
DNA (261bp) protein (87aa)
hypothetical protein id=5046354 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PRC-barrel protein
Tax=CG_Woesearch_03
Meg22_1416_Bin_28_scaffold_6768_20
unknown

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comp(14863..15153)
DNA (291bp) protein (97aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_21
unknown

Not on your lists

comp(15199..15912)
DNA (714bp) protein (238aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_22
unknown

Not on your lists

comp(15964..16722)
DNA (759bp) protein (253aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_6768_23
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16811..17215)
DNA (405bp) protein (135aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:AKB21830.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AKB21830.1};; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase D, 3'-phosphoesterase domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAR9_METMS
Meg22_1416_Bin_28_scaffold_6768_24
RHI_WWE3_38_15, WWE3, Bacteria

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comp(17212..17364)
DNA (153bp) protein (51aa)
Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase) n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB1_9BACT id=29098 bin=ACD24 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Endonuclease III DNA-(Apurinic or apyrimidinic site) lyase
Tax=RIFCSPHIGHO2_12_FULL_WWE3_38_15_curated
Meg22_1416_Bin_28_scaffold_6768_25
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(17376..17693)
DNA (318bp) protein (106aa)
endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=795359 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
Endonuclease III n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C4P9_THEGP
Displaying 25 items

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