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Meg22_1416_Bin_28_scaffold_9524

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_28_scaffold_9524_1
unknown

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_trna_1
unknown

Not on your lists

255..326
DNA (72bp)
transferRNA Gly
Meg22_1416_Bin_28_scaffold_9524_2
unknown

Not on your lists

comp(330..641)
DNA (312bp) protein (104aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_3
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

727..1740
DNA (1014bp) protein (338aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
Wyosine base formation family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG85_ACIB4
Wyosine base formation domain protein
Meg22_1416_Bin_28_scaffold_9524_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1825..2397)
DNA (573bp) protein (191aa)
30S ribosomal protein S3Ae n=1 Tax=Halogranum salarium B-1 RepID=J3JGM1_9EURY
30S ribosomal protein S3Ae
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Meg22_1416_Bin_28_scaffold_9524_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(2512..3378)
DNA (867bp) protein (289aa)
Putative uncharacterized protein id=5041674 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RecB family exonuclease
Tax=CG_Aenigma_01
Meg22_1416_Bin_28_scaffold_9524_6
unknown

Not on your lists

comp(3438..3776)
DNA (339bp) protein (113aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_7
unknown

Not on your lists

comp(3790..4143)
DNA (354bp) protein (118aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_8
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(4472..4765)
DNA (294bp) protein (98aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDM2_METVM
rps15p; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
Meg22_1416_Bin_28_scaffold_9524_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

5037..5570
DNA (534bp) protein (178aa)
hypothetical protein id=5043713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
Meg22_1416_Bin_28_scaffold_9524_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

5545..5766
DNA (222bp) protein (74aa)
coiled-coil id=5043714 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Meg22_1416_Bin_28_scaffold_9524_11
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

comp(5960..6508)
DNA (549bp) protein (183aa)
Cytidine deaminase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B471_PARDP
cytidine deaminase
Tax=CG_CP02_01
Meg22_1416_Bin_28_scaffold_9524_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6480..7073)
DNA (594bp) protein (198aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] id=18248002 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Mn2+dependent serine/threonine protein kinase
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_9524_13
unknown

Not on your lists

7130..8227
DNA (1098bp) protein (366aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_14
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists


comp(8224..9207)
DNA (984bp) protein (328aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJS3_ACIS0
metallohydrolase, glycoprotease/Kae1 family
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:AGB04270.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
Meg22_1416_Bin_28_scaffold_9524_15
unknown

Not on your lists

9307..10074
DNA (768bp) protein (256aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(10093..10311)
DNA (219bp) protein (73aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLM8_THELI
30S ribosomal protein S27
Tax=CG_Pacearch_03
Meg22_1416_Bin_28_scaffold_9524_17
nanoarchaeote Nst1, Nanoarchaeota, Archaea

Not on your lists

comp(10311..10622)
DNA (312bp) protein (104aa)
30S ribosomal protein S24e n=1 Tax=nanoarchaeote Nst1 RepID=R1E3K9_9ARCH
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
rps24e; 30S ribosomal protein S24
Meg22_1416_Bin_28_scaffold_9524_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10629..10814)
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MLW9_9EURY
DNA-directed RNA polymerase, subunit E''
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Meg22_1416_Bin_28_scaffold_9524_19
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(10881..11462)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase subunit E'
Meg22_1416_Bin_28_scaffold_9524_20
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(11489..11854)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DRD6_METV3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI35696.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
Meg22_1416_Bin_28_scaffold_9524_21
unknown

Not on your lists

11900..12370
DNA (471bp) protein (157aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_22
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(12367..13587)
DNA (1221bp) protein (407aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM
small GTP-binding protein
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Meg22_1416_Bin_28_scaffold_9524_23
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(13636..13980)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q8L8_METMZ
transcriptional regulator
Tax=CG_Pacearch_01
Meg22_1416_Bin_28_scaffold_9524_24
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13973..15190)
DNA (1218bp) protein (406aa)
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase id=5799766 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
Meg22_1416_Bin_28_scaffold_9524_25
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15202..16119)
DNA (918bp) protein (306aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=95852 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
TrxB2; thioredoxin reductase
Tax=CG_Pacearch_04
Meg22_1416_Bin_28_scaffold_9524_26
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16112..16450)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036C4E53
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
Meg22_1416_Bin_28_scaffold_9524_27
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


comp(16588..17019)
DNA (432bp) protein (144aa)
30S ribosomal protein S6e n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3F4_FERPA
ribosomal protein S6e
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
Meg22_1416_Bin_28_scaffold_9524_28
unknown

Not on your lists

comp(17065..17427)
DNA (363bp) protein (121aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_9524_trna_2
unknown

Not on your lists

17566..17638
DNA (73bp)
transferRNA Val
Displaying items 1-30 of 57 in total

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