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Meg22_1416_Bin_28_scaffold_11069

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_28_scaffold_11069_1

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86..475
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRT7_METIM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
Meg22_1416_Bin_28_scaffold_11069_2
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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488..1018
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM73_METOI
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1).;"
Meg22_1416_Bin_28_scaffold_11069_3
CG_Woesearch_02, Woesearchaeota, Archaea

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1024..1650
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037197A6
50S ribosomal protein L32e
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_11069_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1812..2357
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381F97D
50S ribosomal protein L19
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_11069_5
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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2357..2875
DNA (519bp) protein (173aa)
50S ribosomal protein L18P n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRT3_METIM
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Meg22_1416_Bin_28_scaffold_11069_6
CG_Woesearch_02, Woesearchaeota, Archaea

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2856..3587
DNA (732bp) protein (244aa)
Ribosomal protein S5 id=5800043 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S5
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_11069_7

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3587..3937
DNA (351bp) protein (117aa)
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5042322 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L30, large subunit ribosomal protein L30 {ECO:0000313|EMBL:KHO46820.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L30P
Meg22_1416_Bin_28_scaffold_11069_8

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3947..4327
DNA (381bp) protein (127aa)
50S ribosomal protein L15 n=1 Tax=Clostridium sp. CAG:1193 RepID=R5IXA9_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15
Meg22_1416_Bin_28_scaffold_11069_9

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4317..5687
DNA (1371bp) protein (457aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1416_Bin_28_scaffold_11069_10
unknown

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5791..5925
DNA (135bp) protein (45aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_11
unknown

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5944..6771
DNA (828bp) protein (276aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_12
AR20, Woesearchaeaota, DPANN, Archaea

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6819..7268
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
Meg22_1416_Bin_28_scaffold_11069_13
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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7315..7572
DNA (258bp) protein (86aa)
50S ribosomal protein L34e n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=RL34_THEON
rpl34e; 50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000255|HAMAP-Rule:MF_00349}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (strain NA1).;"
Meg22_1416_Bin_28_scaffold_11069_14

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7621..8280
DNA (660bp) protein (220aa)
Cytidylate kinase (Cmk) {ECO:0000313|EMBL:AIE93361.1}; EC=2.7.4.14 {ECO:0000313|EMBL:AIE93361.1};; TaxID=1455909 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_33_G09.;"
cmk; Cytidylate kinase (EC:2.7.4.25)
Putative adenylate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ART5_9ARCH
Meg22_1416_Bin_28_scaffold_11069_15

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8327..8650
DNA (324bp) protein (108aa)
50S ribosomal protein L14e n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALY6_METOI id=5103278 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L14e
50S ribosomal protein L14e {ECO:0000313|EMBL:AJF62559.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1416_Bin_28_scaffold_11069_16
unknown

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comp(8789..9181)
DNA (393bp) protein (131aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_17
unknown

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9245..9805
DNA (561bp) protein (187aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_18
AR15, Woesearchaeaota, DPANN, Archaea

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9854..10798
DNA (945bp) protein (315aa)
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H/ACA RNA-protein complex component Cbf5p
Tax=AR15
Meg22_1416_Bin_28_scaffold_11069_19
AR15, Woesearchaeaota, DPANN, Archaea

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comp(10773..11411)
DNA (639bp) protein (213aa)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase small
Tax=AR15
Meg22_1416_Bin_28_scaffold_11069_20
unknown

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11484..12863
DNA (1380bp) protein (460aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_21
unknown

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12965..13801
DNA (837bp) protein (279aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_trna_1
unknown

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13865..13949
DNA (85bp)
transferRNA Ser
Meg22_1416_Bin_28_scaffold_11069_22
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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14027..14512
DNA (486bp) protein (162aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A4ACD
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
rps13p; 30S ribosomal protein S13P
Meg22_1416_Bin_28_scaffold_11069_23
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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14529..15095
DNA (567bp) protein (189aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus sp. AM4 RepID=B7R327_9EURY
30S ribosomal protein S9
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
Meg22_1416_Bin_28_scaffold_11069_24
CG_Woesearch_01, Woesearchaeota, Archaea

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15098..15673
DNA (576bp) protein (192aa)
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11
Tax=CG_Woesearch_01
Meg22_1416_Bin_28_scaffold_11069_25
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15670..16461
DNA (792bp) protein (264aa)
DNA-directed RNA polymerase subunit D n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX00_FERPA
RNA polymerase insert
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1416_Bin_28_scaffold_11069_trna_2
unknown

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16512..16595
DNA (84bp)
transferRNA Leu
Meg22_1416_Bin_28_scaffold_11069_26
unknown

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16776..16892
DNA (117bp) protein (39aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_27
unknown

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comp(16834..18033)
DNA (1200bp) protein (400aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_11069_28
CG_Woesearch_02, Woesearchaeota, Archaea

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18203..18568
DNA (366bp) protein (122aa)
50S ribosomal protein L18e n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBF5_ACIB4
ribosomal protein L15
Tax=CG_Woesearch_02
Displaying items 1-30 of 40 in total

View Taxonomy