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Meg22_1416_Bin_28_scaffold_25259

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_28_scaffold_25259_trna_3
unknown

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comp(15..87)
DNA (73bp)
transferRNA Asp
Meg22_1416_Bin_28_scaffold_25259_trna_1
unknown

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193..309
DNA (117bp)
transferRNA Tyr
Meg22_1416_Bin_28_scaffold_25259_trna_2
unknown

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459..532
DNA (74bp)
transferRNA Lys
Meg22_1416_Bin_28_scaffold_25259_1
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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621..902
DNA (282bp) protein (94aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
DNA-directed RNA polymerase subunit H n=2 Tax=Pyrococcus furiosus RepID=RPOH_PYRFU
Meg22_1416_Bin_28_scaffold_25259_2

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895..2409
DNA (1515bp) protein (505aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:KHO52597.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO52597.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-directed RNA polymerase n=6 Tax=Thermococcus RepID=Q5JE32_PYRKO id=5103779 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Meg22_1416_Bin_28_scaffold_25259_3
CG_Woesearch_01, Woesearchaeota, Archaea

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2418..4220
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CEA
DNA-directed RNA polymerase
Tax=CG_Woesearch_01
Meg22_1416_Bin_28_scaffold_25259_4

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4232..6805
DNA (2574bp) protein (858aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV id=5103777 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Meg22_1416_Bin_28_scaffold_25259_5
CG_Woesearch_02, Woesearchaeota, Archaea

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6802..7878
DNA (1077bp) protein (359aa)
DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIC1_PYRSN
DNA-directed RNA polymerase subunit A'
Tax=CG_Woesearch_02
Meg22_1416_Bin_28_scaffold_25259_6
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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7927..8190
DNA (264bp) protein (88aa)
50S ribosomal protein L30e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR6_METFV
50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Meg22_1416_Bin_28_scaffold_25259_7
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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8187..8615
DNA (429bp) protein (143aa)
NusA family KH domain protein, archaeal n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BEL7_9EURY
NusA family KH domain protein, archaeal
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
Meg22_1416_Bin_28_scaffold_25259_8
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(8629..8925)
DNA (297bp) protein (99aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Halanaerobium sp. (strain; sapolanicus)).;"
Acylphosphatase n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKR0_HALHG
acylphosphatase
Meg22_1416_Bin_28_scaffold_25259_9
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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9056..9493
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS' RepID=F2UU03_9EURY
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=994838 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'.;"
SSU ribosomal protein S23e (S12p)
Meg22_1416_Bin_28_scaffold_25259_10
AR20, Woesearchaeaota, DPANN, Archaea

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9495..10121
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003631D04
30S ribosomal protein S7
Tax=AR20
Meg22_1416_Bin_28_scaffold_25259_11

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10319..12502
DNA (2184bp) protein (728aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003662C39
Elongation factor 2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1416_Bin_28_scaffold_25259_12
AR20, Woesearchaeaota, DPANN, Archaea

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12614..13885
DNA (1272bp) protein (424aa)
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
Tax=AR20
Meg22_1416_Bin_28_scaffold_25259_13
unknown

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comp(13919..14482)
DNA (564bp) protein (188aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_25259_14
CG_Micra_04, Micraarchaeota, Archaea

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14583..14843
DNA (261bp) protein (87aa)
30S ribosomal protein S10 n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SHM6_9EURY
rps10; 30S ribosomal protein S10
Tax=CG_Micra_04
Meg22_1416_Bin_28_scaffold_25259_15
unknown

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14935..16035
DNA (1101bp) protein (367aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_25259_16

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comp(16050..16838)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97912.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
Meg22_1416_Bin_28_scaffold_25259_17
unknown

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16995..17102
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 20 items

View Taxonomy