ggKbase home page

Meg22_1416_Bin_28_scaffold_54890

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_28_scaffold_54890_1
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..455)
DNA (453bp) protein (151aa)
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=5084559 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
50S ribosomal protein L25/general stress protein Ctc
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
Meg22_1416_Bin_28_scaffold_54890_2
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(527..1630)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365B047
rod shape-determining protein
Tax=CG_Kuenen_03
Meg22_1416_Bin_28_scaffold_54890_3
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(1644..2456)
DNA (813bp) protein (271aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase id=1899024 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Meg22_1416_Bin_28_scaffold_54890_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2431..3009)
DNA (579bp) protein (193aa)
Histidyl tRNA synthetase suspected. See adjacent gene [Meg22_1416_Bin_28_scaffold_54890_3].
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Histidine--tRNA ligase id=1899024 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
histidyl-tRNA synthetase
Meg22_1416_Bin_28_scaffold_54890_5
R_RIF_OD1_04_46_16, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

comp(3019..3639)
DNA (621bp) protein (207aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I id=1899026 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_04_46_16_curated
Meg22_1416_Bin_28_scaffold_54890_6
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3640..3993)
DNA (354bp) protein (118aa)
hypothetical protein id=5801699 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
Meg22_1416_Bin_28_scaffold_54890_7
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3997..4689)
DNA (693bp) protein (231aa)
glycosyl transferase family protein id=31640 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Bifunctional phosphatase/dolichol-phosphate glucosyltransferase
Tax=CG_Kuenen_03
Meg22_1416_Bin_28_scaffold_54890_8
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4676..5728)
DNA (1053bp) protein (351aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=120746 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=CG_Kuenen_03
Meg22_1416_Bin_28_scaffold_54890_9
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5746..6450)
DNA (705bp) protein (235aa)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
hypothetical protein id=5801381 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
Meg22_1416_Bin_28_scaffold_54890_10
GWC2_OD1_45_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6751..7827)
DNA (1077bp) protein (359aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKU13785.1}; TaxID=1619050 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_45_8.;"
Polyribonucleotide nucleotidyltransferase id=1921139 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Meg22_1416_Bin_28_scaffold_54890_11
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7867..8403)
DNA (537bp) protein (179aa)
hypothetical protein id=5464 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
Meg22_1416_Bin_28_scaffold_54890_12
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(8425..8688)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5LQT4_9MOLU
30S ribosomal protein S15
Tax=CG_Falkow_03
Meg22_1416_Bin_28_scaffold_54890_13
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

8836..9852
DNA (1017bp) protein (339aa)
Tyrosine recombinase XerC n=1 Tax=uncultured bacterium RepID=K2BT77_9BACT
putative Tyrosine recombinase xerD
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
Meg22_1416_Bin_28_scaffold_54890_trna_1
unknown

Not on your lists

9815..9886
DNA (72bp)
transferRNA Arg
Displaying 14 items

View Taxonomy