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Meg22_1416_Bin_53_scaffold_3024

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_53_scaffold_3024_1

Not on your lists

comp(3..500)
DNA (498bp) protein (166aa)
Marine sediment metagenome DNA, contig: S06H3_S04942 {ECO:0000313|EMBL:GAI31052.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1416_Bin_53_scaffold_3024_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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878..3478
DNA (2601bp) protein (867aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP-dependent helicase Lhr and Lhr-like protein helicase (EC:3.6.4.-)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_3024_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

3566..4540
DNA (975bp) protein (325aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Campylobacter upsaliensis JV21 RepID=E6L8K6_CAMUP
Tax=AR6
Meg22_1416_Bin_53_scaffold_3024_4

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4585..5346
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
Uncharacterized protein {ECO:0000313|EMBL:KHO50038.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
Meg22_1416_Bin_53_scaffold_3024_trna_1
unknown

Not on your lists

comp(5347..5430)
DNA (84bp)
transferRNA Ser
Meg22_1416_Bin_53_scaffold_3024_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5516..5944)
DNA (429bp) protein (143aa)
hypothetical protein id=5041664 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR6
Meg22_1416_Bin_53_scaffold_3024_6
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(5946..6206)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003677CBE
PRC-barrel protein
Tax=CG_Pacearch_02
Meg22_1416_Bin_53_scaffold_3024_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6580..7794
DNA (1215bp) protein (405aa)
ORC1-type DNA replication protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF40_9EURY id=5103158 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ORC1-type DNA replication protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_3024_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

7791..9356
DNA (1566bp) protein (522aa)
NEQ240 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR7_NANEQ id=5103157 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_05
Meg22_1416_Bin_53_scaffold_3024_9
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

9358..12849
DNA (3492bp) protein (1164aa)
DNA polymerase II large subunit n=1 Tax=nanoarchaeote Nst1 RepID=R1E5T5_9ARCH id=5103156 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase II large subunit
Tax=CG_Pacearch_04
Meg22_1416_Bin_53_scaffold_3024_10
unknown

Not on your lists

comp(12866..13138)
DNA (273bp) protein (91aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_11
unknown

Not on your lists

13245..13493
DNA (249bp) protein (83aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_12
unknown

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13567..13974
DNA (408bp) protein (136aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(13971..15155)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein
Tax=CG_Pacearch_05
Meg22_1416_Bin_53_scaffold_3024_14
unknown

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comp(15149..15463)
DNA (315bp) protein (105aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(15495..16406)
DNA (912bp) protein (304aa)
TGS domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6R3_ANADF id=5224645 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_3024_16
unknown

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16458..17828
DNA (1371bp) protein (457aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_17

Not on your lists

comp(17825..18730)
DNA (906bp) protein (302aa)
Phosphate uptake regulator, PhoU id=5043747 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phosphate uptake regulator, PhoU {ECO:0000313|EMBL:KHO47063.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
Meg22_1416_Bin_53_scaffold_3024_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18841..19872
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=O26612_METTH
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_3024_19
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

19971..20303
DNA (333bp) protein (111aa)
Tax=CG_Micra_06
Meg22_1416_Bin_53_scaffold_3024_20
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20300..20515
DNA (216bp) protein (72aa)
hydrogenase expression/formation protein HypC
Tax=S_Thermoanaerobacterales_50_218
Meg22_1416_Bin_53_scaffold_3024_21
unknown

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20502..21143
DNA (642bp) protein (214aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_22
unknown

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21140..21568
DNA (429bp) protein (143aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_3024_23

Not on your lists

comp(21495..22757)
DNA (1263bp) protein (421aa)
nickel-dependent hydrogenase id=5048725 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nickel-dependent hydrogenase {ECO:0000313|EMBL:KHO45388.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Ni/Fe hydrogenase, alpha subunit
Meg22_1416_Bin_53_scaffold_3024_24
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(22742..23488)
DNA (747bp) protein (249aa)
sulfhydrogenase subunit delta id=5048726 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=AR13
Meg22_1416_Bin_53_scaffold_3024_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

23650..24342
DNA (693bp) protein (231aa)
Putative ATP binding protein n=1 Tax=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) RepID=B8D5E4_DESK1
putative ATP binding protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_3024_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

24367..25563
DNA (1197bp) protein (399aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M1G6_GEODF
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_3024_27
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

25502..26368
DNA (867bp) protein (289aa)
Arginase id=5799599 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Arginase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1416_Bin_53_scaffold_3024_28

Not on your lists

26365..26901
DNA (537bp) protein (179aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
2'-5' RNA ligase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LM11_THEBM
2'-5' RNA ligase
Meg22_1416_Bin_53_scaffold_3024_29
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(26916..27533)
DNA (618bp) protein (206aa)
Hef nuclease id=5800171 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Hef nuclease
Tax=CG_Pacearch_06
Displaying items 1-30 of 56 in total

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