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Meg22_1416_Bin_53_scaffold_4406

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_53_scaffold_4406_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1..975)
DNA (975bp) protein (325aa)
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_4406_2
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1071..1565)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D885_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG17824.1}; Flags: Precursor;; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
Meg22_1416_Bin_53_scaffold_4406_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1648..2691)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003662C39
Elongation factor 2
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_4406_4
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(2639..3712)
DNA (1074bp) protein (358aa)
Elongation factor 2 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=EF2_METJA
translation elongation factor aEF-2
Tax=CG_Pacearch_04
Meg22_1416_Bin_53_scaffold_4406_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(3714..4328)
DNA (615bp) protein (205aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ
30S ribosomal protein S7P
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_4406_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(4330..4752)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_4406_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4819..5238)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
nusA; transcription elongation factor NusA-like protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_4406_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5309..8812)
DNA (3504bp) protein (1168aa)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV id=5103777 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1416_Bin_53_scaffold_4406_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(8814..12116)
DNA (3303bp) protein (1101aa)
DNA-directed RNA polymerase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIC3_PYRSN
DNA-directed RNA polymerase subunit B
Tax=CG_Pacearch_05
Meg22_1416_Bin_53_scaffold_4406_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(12125..12325)
DNA (201bp) protein (67aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_4406_11
unknown

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comp(12451..12711)
DNA (261bp) protein (87aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_4406_trna_1
unknown

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comp(12800..12873)
DNA (74bp)
transferRNA Lys
Meg22_1416_Bin_53_scaffold_4406_12

Not on your lists

comp(12912..13241)
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Stomatobaculum longum RepID=H1HVH1_9FIRM
Thioredoxin {ECO:0000313|EMBL:KHO52243.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
trxA2; thioredoxin-1
Meg22_1416_Bin_53_scaffold_4406_13
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13338..16442)
DNA (3105bp) protein (1035aa)
Similar to oxygen sensitive ribonucleoside triphosphate reductase NrdD id=2517775 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ribonucleoside-triphosphate reductase class III catalytic subunit
Tax=GWC2_Elusimicrobia_56_31_curated
Meg22_1416_Bin_53_scaffold_4406_14
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16439..16927)
DNA (489bp) protein (163aa)
ATP-cone domain protein; K07738 transcriptional repressor NrdR id=1241860 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
nrdR; transcriptional regulator NrdR
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
Meg22_1416_Bin_53_scaffold_4406_15
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17131..17736
DNA (606bp) protein (202aa)
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase id=4922380 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
Meg22_1416_Bin_53_scaffold_4406_16

Not on your lists

17818..18270
DNA (453bp) protein (151aa)
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT id=5103482 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AJF62763.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1416_Bin_53_scaffold_4406_17
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(18412..19428)
DNA (1017bp) protein (339aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=662760 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
Tyrosyl-tRNA synthetase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG16_9EURY
Tyrosyl-tRNA synthetase
Meg22_1416_Bin_53_scaffold_4406_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

19513..19785
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FED2_9BACT
hypothetical protein
Tax=CG_Pacearch_06
Meg22_1416_Bin_53_scaffold_4406_19
unknown

Not on your lists

19889..20851
DNA (963bp) protein (321aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_4406_20
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(20841..21701)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7644
hypothetical protein
Tax=AR13
Meg22_1416_Bin_53_scaffold_4406_21
unknown

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comp(21707..21979)
DNA (273bp) protein (91aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_4406_22
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(21951..22394)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E0B7_9BACT
nitrogen-fixing NifU-like
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1416_Bin_53_scaffold_4406_23

Not on your lists

comp(22391..22630)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Treponema pedis str. T A4 RepID=S6A2K4_9SPIO
Marine sediment metagenome DNA, contig: S01H1_S17040 {ECO:0000313|EMBL:GAG22358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1416_Bin_53_scaffold_4406_24
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22639..23796)
DNA (1158bp) protein (386aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
Probable cysteine desulfurase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W481_UNCMA
class V aminotransferase (NifS-like)
Meg22_1416_Bin_53_scaffold_4406_25

Not on your lists

comp(23836..24201)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377269B
Marine sediment metagenome DNA, contig: S01H1_L01890 {ECO:0000313|EMBL:GAF85470.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1416_Bin_53_scaffold_4406_26
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(24257..24745)
DNA (489bp) protein (163aa)
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:KKU70659.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
Exonuclease RNase T and DNA polymerase III id=2768922 bin=GWC2_Bacteroidetes_40_22 species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Meg22_1416_Bin_53_scaffold_4406_27
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24898..25086)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00038126DD
ferredoxin
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Meg22_1416_Bin_53_scaffold_4406_28
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

25188..26066
DNA (879bp) protein (293aa)
Heat shock protein HtpX (EC:3.4.24.-)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376731D
Tax=CG_Pacearch_03
Meg22_1416_Bin_53_scaffold_4406_29

Not on your lists

26132..27802
DNA (1671bp) protein (557aa)
pyrG; CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=5048443 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
pyrG; CTP synthase (EC:6.3.4.2)
Displaying items 1-30 of 56 in total

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