ggKbase home page

Meg22_46_Bin_5_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 321 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_46_Bin_5_scaffold_1_1
unknown

Not on your lists

comp(146..1147)
DNA (1002bp) protein (334aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1418..1750)
DNA (333bp) protein (111aa)
id=4744551 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Tax=CG_Woesearch_02
Meg22_46_Bin_5_scaffold_1_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1750..1953)
DNA (204bp) protein (68aa)
Tax=CG_Woesearch_02
Meg22_46_Bin_5_scaffold_1_4
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

2177..3910
DNA (1734bp) protein (578aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein (EC:1.3.5.1)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LTH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67508.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
Meg22_46_Bin_5_scaffold_1_5
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

3883..4647
DNA (765bp) protein (255aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVS9_9EURY
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EFD92684.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
fumarate reductase iron-sulfur subunit
Meg22_46_Bin_5_scaffold_1_6
unknown

Not on your lists

4647..5276
DNA (630bp) protein (210aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_7
Acinetobacter indicus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5307..7256
DNA (1950bp) protein (650aa)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=1341679 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter indicus CIP 110367.;"
NAD-dependent malic enzyme n=1 Tax=Acinetobacter sp. CIP 53.82 RepID=N9MCE6_9GAMM
malate dehydrogenase
Meg22_46_Bin_5_scaffold_1_8

Not on your lists

7296..7928
DNA (633bp) protein (211aa)
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D id=5800555 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Meg22_46_Bin_5_scaffold_1_9
unknown

Not on your lists

comp(7931..8263)
DNA (333bp) protein (111aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_10
unknown

Not on your lists

comp(8296..8730)
DNA (435bp) protein (145aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8736..10589)
DNA (1854bp) protein (618aa)
Putative uncharacterized protein id=5800820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
Meg22_46_Bin_5_scaffold_1_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10595..12043)
DNA (1449bp) protein (483aa)
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
Meg22_46_Bin_5_scaffold_1_13

Not on your lists

comp(12194..13123)
DNA (930bp) protein (310aa)
rhamnosyltransferase (EC:2.4.1.-)
glycosyl transferase family protein; K12992 rhamnosyltransferase [EC:2.4.1.-] id=5241199 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Marine sediment metagenome DNA, contig: S01H4_C00806 {ECO:0000313|EMBL:GAG56776.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_46_Bin_5_scaffold_1_14
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

13267..14301
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003818151
Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
Meg22_46_Bin_5_scaffold_1_15
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14364..15179
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB24716.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
Meg22_46_Bin_5_scaffold_1_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(15176..16267)
DNA (1092bp) protein (364aa)
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Type 2 DNA topoisomerase 6 subunit A
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_46_Bin_5_scaffold_1_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16264..18000)
DNA (1737bp) protein (579aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
Tax=CG_Woesearch_02
Meg22_46_Bin_5_scaffold_1_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(18029..18598)
DNA (570bp) protein (190aa)
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
KH domain protein
Tax=CG_Woesearch_02
Meg22_46_Bin_5_scaffold_1_19

Not on your lists

comp(18636..19976)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae NBB3 RepID=G8RHH6_MYCRH id=1242211 bin=RBG2 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S01H1_S08229 {ECO:0000313|EMBL:GAG06500.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_46_Bin_5_scaffold_1_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

20040..20591
DNA (552bp) protein (184aa)
Putative metallo-beta-lactamase superfamily n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZN5_THERP
Putative metallo-beta-lactamase superfamily {ECO:0000313|EMBL:ACM04773.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
hypothetical protein
Meg22_46_Bin_5_scaffold_1_21
unknown

Not on your lists

comp(20612..21505)
DNA (894bp) protein (298aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_22
unknown

Not on your lists

comp(21597..22025)
DNA (429bp) protein (143aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_23
unknown

Not on your lists

comp(22254..23153)
DNA (900bp) protein (300aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_24
unknown

Not on your lists

23238..23978
DNA (741bp) protein (247aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_25
Trichuris suis, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

Not on your lists

23981..25111
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2VKY6_CAEJA
Uncharacterized protein {ECO:0000313|EMBL:KFD48923.1}; TaxID=68888 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" source="Trichuris suis (pig whipworm).;"
Hypothetical protein
Meg22_46_Bin_5_scaffold_1_26

Not on your lists

25154..25729
DNA (576bp) protein (192aa)
Small-conductance mechanosensitive channel n=2 Tax=Thermococcus RepID=G0HKF9_THES4 id=5103554 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AJF62835.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_46_Bin_5_scaffold_1_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(25726..25971)
DNA (246bp) protein (82aa)
hypothetical protein; K09721 hypothetical protein id=5044066 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_01
Meg22_46_Bin_5_scaffold_1_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(26001..26333)
DNA (333bp) protein (111aa)
Prefoldin subunit beta n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDB_METKA id=5103033 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prefoldin subunit beta
Tax=CG_Woesearch_02
Meg22_46_Bin_5_scaffold_1_29
unknown

Not on your lists

comp(26311..26562)
DNA (252bp) protein (84aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_1_30
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(26566..26703)
DNA (138bp) protein (46aa)
RNA polymerase Rbp10 id=5799817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR11
Displaying items 1-30 of 321 in total

View Taxonomy