ggKbase home page

Meg22_46_Bin_5_scaffold_32006

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_46_Bin_5_scaffold_32006_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_32006_2

Not on your lists

419..607
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036B4B61
Marine sediment metagenome DNA, contig: S12H4_S12212 {ECO:0000313|EMBL:GAJ07261.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_46_Bin_5_scaffold_32006_3

Not on your lists

615..1685
DNA (1071bp) protein (357aa)
transcriptional regulator n=1 Tax=Gracilimonas tropica RepID=UPI000374B0A3
Marine sediment metagenome DNA, contig: S03H2_S04460 {ECO:0000313|EMBL:GAH54347.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ihfA-1; integration host factor subunit alpha
Meg22_46_Bin_5_scaffold_32006_4
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1795..2658
DNA (864bp) protein (288aa)
RNA polymerase sigma factor RpoD id=3691435 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
RNA polymerase, sigma 70 subunit, rpod subfamily
Tax=GWE2_Bacteroidetes_32_14_curated
Meg22_46_Bin_5_scaffold_32006_5
unknown

Not on your lists

2917..3294
DNA (378bp) protein (126aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_32006_6
unknown

Not on your lists

3397..3627
DNA (231bp) protein (77aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_32006_7
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3893..6043)
DNA (2151bp) protein (717aa)
Uncharacterized protein (Fragment) id=2651126 bin=GWC2_Bacteroidetes_40_22 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
Meg22_46_Bin_5_scaffold_32006_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6735..7256)
DNA (522bp) protein (174aa)
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ADO74658.1}; Probable dehydrogenase/ reductase 7 {ECO:0000313|EMBL:EAU70082.1}; EC=1.1.1.- {ECO:0000313|EMBL:EAU70082.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09ED2_STIAD
short chain dehydrogenase
Meg22_46_Bin_5_scaffold_32006_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(7300..8265)
DNA (966bp) protein (322aa)
glycine C-acetyltransferase (EC:2.3.1.29)
Serine palmitoyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=A7BFV7_9SPHI
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Meg22_46_Bin_5_scaffold_32006_10
unknown

Not on your lists

comp(8204..8356)
DNA (153bp) protein (51aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_32006_11
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

8956..9414
DNA (459bp) protein (153aa)
Molybdenum cofactor synthesis domain protein id=3494767 bin=GWF2_Bacteroidetes_41_31 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
molybdenum cofactor synthesis protein
Tax=CG_Bacteroid_01
Meg22_46_Bin_5_scaffold_32006_12
unknown

Not on your lists

comp(9776..10012)
DNA (237bp) protein (79aa)

This feature has no annotations

Meg22_46_Bin_5_scaffold_32006_13
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(10118..10516)
DNA (399bp) protein (133aa)
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
Displaying 13 items

View Taxonomy