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Meg22_810_Bin_212_scaffold_19681

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_212_scaffold_19681_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..1313)
DNA (1311bp) protein (437aa)
60 kDa chaperonin n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=CH60_METAC
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
groEL; molecular chaperone GroEL
Meg22_810_Bin_212_scaffold_19681_2
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1315..1590)
DNA (276bp) protein (92aa)
10 kDa chaperonin n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9S7_METMS
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
Meg22_810_Bin_212_scaffold_19681_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1768..2286
DNA (519bp) protein (173aa)
transcriptional regulator, AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA id=5048662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_810_Bin_212_scaffold_19681_4

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2493..2915
DNA (423bp) protein (141aa)
Marine sediment metagenome DNA, contig: S06H3_S27424 {ECO:0000313|EMBL:GAI55554.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
Meg22_810_Bin_212_scaffold_19681_5

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2915..3589
DNA (675bp) protein (225aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S06H3_S03024 {ECO:0000313|EMBL:GAI24595.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S7
Meg22_810_Bin_212_scaffold_19681_6
CG_Pacearch_05, Pacearchaeota, Archaea

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3659..5848
DNA (2190bp) protein (730aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2
Tax=CG_Pacearch_05
Meg22_810_Bin_212_scaffold_19681_7
unknown

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5868..6278
DNA (411bp) protein (137aa)

This feature has no annotations

Meg22_810_Bin_212_scaffold_19681_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(6815..7174)
DNA (360bp) protein (120aa)
chemotaxis protein CheY n=1 Tax=Clostridium sp. JC122 RepID=UPI00028853EF
OmpR; response regulator consisting of a CheY-like receiver domain
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_810_Bin_212_scaffold_19681_9
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(7228..8049)
DNA (822bp) protein (274aa)
Putative rRNA methyltransferase n=1 Tax=Escherichia coli RepID=D2KC32_ECOLX
rmtC
Tax=CG_Pacearch_06
Meg22_810_Bin_212_scaffold_19681_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8198..9484
DNA (1287bp) protein (429aa)
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_810_Bin_212_scaffold_19681_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10071..11237
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CD3F1
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_810_Bin_212_scaffold_19681_12

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11283..11582
DNA (300bp) protein (100aa)
Marine sediment metagenome DNA, contig: S06H3_L02822 {ECO:0000313|EMBL:GAI05144.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_212_scaffold_19681_13
unknown

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11719..12369
DNA (651bp) protein (217aa)

This feature has no annotations

Meg22_810_Bin_212_scaffold_19681_14

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12404..12817
DNA (414bp) protein (138aa)
Marine sediment metagenome DNA, contig: S06H3_L02822 {ECO:0000313|EMBL:GAI05144.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_212_scaffold_19681_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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12908..13621
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CCE42
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying 15 items

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