ggKbase home page

Meg22_810_Bin_254_scaffold_41681

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_254_scaffold_41681_1

Not on your lists

1..399
DNA (399bp) protein (133aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
helicase (EC:3.6.4.-)
Meg22_810_Bin_254_scaffold_41681_trna_1
unknown

Not on your lists

438..544
DNA (107bp)
transferRNA Arg
Meg22_810_Bin_254_scaffold_41681_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

687..2330
DNA (1644bp) protein (548aa)
Thermosome, chaperonin Cpn60/TCP-1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRK6_9EURY id=5103700 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Thermosome, chaperonin Cpn60/TCP-1
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2428..2913
DNA (486bp) protein (162aa)
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2939..3202
DNA (264bp) protein (88aa)
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3207..3389)
DNA (183bp) protein (61aa)
id=5046621 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3419..5107)
DNA (1689bp) protein (563aa)
Glutamate--tRNA ligase id=5800680 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamate-tRNA ligase
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5203..6084
DNA (882bp) protein (294aa)
Metallophosphoesterase n=1 Tax=uncultured bacterium RepID=K2E1F8_9BACT
calcineurin-like phosphoesterase
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6157..6681
DNA (525bp) protein (175aa)
Rubrerythrin n=1 Tax=uncultured bacterium RepID=K1YX62_9BACT
rubrerythrin
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6693..7019
DNA (327bp) protein (109aa)
desulfoferrodoxin (EC:1.15.1.1)
Superoxide reductase n=6 Tax=Clostridium botulinum RepID=B1L213_CLOBM
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7191..7403
DNA (213bp) protein (71aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_trna_2
unknown

Not on your lists

7459..7532
DNA (74bp)
transferRNA Ala
Meg22_810_Bin_254_scaffold_41681_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7552..8526
DNA (975bp) protein (325aa)
Putative Fe-S center protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TCS7_9EURY
iron-sulfur-binding protein
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8536..8940
DNA (405bp) protein (135aa)
Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase; K02503 Hit-like protein involved in cell-cycle regulation id=5803115 bin=OD1_GWC2_34_28 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
histidine triad (HIT) protein
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_trna_3
unknown

Not on your lists

8964..9088
DNA (125bp)
transferRNA Met
Meg22_810_Bin_254_scaffold_41681_13
unknown

Not on your lists

9243..9518
DNA (276bp) protein (92aa)

This feature has no annotations

Meg22_810_Bin_254_scaffold_41681_trna_4
unknown

Not on your lists

comp(9520..9618)
DNA (99bp)
transferRNA Ser
Meg22_810_Bin_254_scaffold_41681_14
unknown

Not on your lists

comp(9628..9903)
DNA (276bp) protein (92aa)

This feature has no annotations

Meg22_810_Bin_254_scaffold_41681_15
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9966..10418)
DNA (453bp) protein (151aa)
Tax=CG_Desulfob_01
Meg22_810_Bin_254_scaffold_41681_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


comp(10944..11255)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10
Tax=CG_Woesearch_03
Meg22_810_Bin_254_scaffold_41681_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11333..12643)
DNA (1311bp) protein (437aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043959 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 1-alpha
Tax=CG_Woesearch_01
Meg22_810_Bin_254_scaffold_41681_18

Not on your lists

comp(12724..14886)
DNA (2163bp) protein (721aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Elongation factor 2 id=5800773 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 2
Meg22_810_Bin_254_scaffold_41681_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14896..15393)
DNA (498bp) protein (166aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E6367
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(15390..15578)
DNA (189bp) protein (63aa)
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl24E; 50S ribosomal protein L24E
Tax=CG_Woesearch_02
Meg22_810_Bin_254_scaffold_41681_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(15584..15844)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
30S ribosomal protein S28e
Tax=CG_Woesearch_02
Displaying 25 items

View Taxonomy